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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHC_all.Contig824
Contig Information
Length 469 bp
Tissue Shoot grown with cold treatment
Clones 2 Clones [Download: CSV  ,  FASTA ]
whsc5k17    rwhsc5k17   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0190900 [Oryza sativa (japonica cultivar-group)] >gi|46390968|dbj|BAD16481.1| phytoene dehydrogenase-like protein [Oryza sativa Japonica Group] >gi|50726398|dbj|BAD34009.1| phytoene dehydrogenase-like protein [Oryza sativa Japonica Group] >gi|113535685|dbj|BAF08068.1| Os02g0190900 [Oryza sativa (japonica cultivar-group)] >gi|125538425|gb|EAY84820.1| hypothetical protein OsI_06187 [Oryza sativa Indica Group] >gi|125581115|gb|EAZ22046.1| hypothetical protein OsJ_005529 [Oryza sativa (japonica cultivar-group)] >gi|215766902|dbj|BAG99130.1| unnamed protein product [Oryza sativa Japonica Group]
Score 506
Evalue 6.38647e-50
Total Hit Count 451
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHC_all.Contig824 
CGGGAGCGGGAGGAAGCGCCGGCGATGGCGACTCCAGCGAAGGAGGAGGCGGCGGCAGGGCAGAGAGACGAGCTCGCCGACTCGCTGTCCGAGCTCTTCA
CCAACGTCTCCCTCATGGTCCGCGGCGAGCTCCAGGGAACCAACAACCAGCTCTCGCTGCTTGAAAAGATGAACCAACGCGTGACAGAGGAGTACAGTAA
CCACGGAGATGTTGCATCCGGTCTGCGGGTCTTTGTAGAACAGCTGAACGAGAAAAACCAACGGTTTGACGAGTACACAACACAGATCGACGCGATAGAC
CAGCAGGTGAGTGAGTTTGAGGCAGTGGTGTCCATGCTTGATAAGCATGTCTCCCTCTTGGAGAAGAAAGTGAAGTCCGCATATCACATTGCTCCCACAC
CAATGATTCGTCTCCCAAGCATGTTGTATATCACCCCTATCATCTTCTGTATTCTCTACAAAAAAAAAA
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