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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig32527  (registered. 2012)
Contig Information
Length 878 bp
Clones alternative view 19 Clones [Download: TSV  ,  FASTA ]
Wh_SH - 1
Wh_VHS Shoot with heat shock treatment 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23℃ 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 5
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|548603|sp|P36213.1|PSAD_HORVU|PSAD_HORVU RecName: Full=Photosystem I reaction center subunit II,"
Score 407
Evalue 8.00E-112
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig32527 
CCCGCGCGCGCGTGTGGCCTCCGCTCCTCTCCCCATCTCCTCTCTCGCCAAGGACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCC
TCGGCGGCGACGCGCCACCTGATCACCGCGGCCTGGTCGCCATCCGCCAAGCCCCGCCCCGCCACCCTCGGCATGCCCTCCGCCCGTGGCCCGGCCCCGC
TCTGCGCCGCGGCCCCGGACACCCCCGCCCCCGCCGCGCCGCCGGCGGAGCCCGCCCCCGCGGGCTTCGTGCCGCCGCAGCTGGACCCGTCCACCCCGTC
CCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCCCAGGTCGAGGAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTGTTCGAG
ATGCCCACCGGCGGCGCCGCCATCATGCGCGAGGGCCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCA
AGTACAAGATCGCCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCGGAGAAGGTCAACGCCGG
CAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAAGTTCACCGGCAAGAACTCCTTCGACATCTAATCTCGT
ACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTATTGGCGGGTGGCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGAT
GGATTCGATCGGTGATAATGATGCATCAGGTTATATGTACATGGTAATTTGATGATGATACTGCTGTATGTTAACGTT
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