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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig4379  (registered. 2012)
Contig Information
Length 748 bp
Clones alternative view 142 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 9
Wh_dL Crown of seedling 7
Wh_e Seed DPA10 9
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 3
Wh_oh Pistil at heading date 9
Wh_r Root 2
Wh_yd Spikelet at late flowering 5
Wh_DPA20 Seed DPA20 2
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_KMP Shoot grown under continuous light 2
Wh_MS Seed DPA5 of DT3DL CS wheat 4
Wh_OKCS Seed DPA5 2
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 2
Wh_VSCB Liquid cultured tissue 6
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 4
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 1
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 3
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_CA 1
WH_SP 8
WH_XA Root 11
WH_XB Root 3
WH_XC Root, treated at 50 microM Al for 6h 9
WH_XD Root, treated at 50 microM Al for 6h 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115445581|ref|NP_001046570.1|| Os02g0284600 [Oryza sativa (japonica cultivar-group)]
Score 254
Evalue 9.00E-66
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig4379 
TTTTTTTTTTCAAGAAGTAATAACACTGAACAAAATTCCAACAAAGATCTATTCTTCACATGATTTAACACATGAAACATCATCATATCTCATAAGATCC
AAGCTAAACACAGAGTCTTCTTCATGGGCAATACCAAAACAGGACACCTTAAGCGCAGCAACAGTCACCGATAACAAGCAACTAAAAATGTAAAGGGTTC
GGGTAGTAATAACGGCAGAGACCGCCCTGGCGCGGCCGGCCGGCCTAGAAGCGGAGCTTGGTGAAGAACCACCTGTTCTTGCCGGTCTTGAACCTCTCCT
CGAGCTTGGCCTTGGCGGCCTTGGCGGCGCCCACCTTCTTGTCCTTGGAGGTGAGGGAGTCGGGCGCGCCGGAGGCCACCTCCTTGAGGTCGACGTCGAG
GGTATAGCGGGTGGGCATGAGATGGGTGAAGTTGACGAGCTTGAGGAACACCTTGACGCGGGACTTCTTGGCCGTCTTCTTGGCCGAGTCCTTGCGGATC
ACCTTCTTCGGGTACTTGGCCAGCCCGGCGACGAGGCAGTGCCCGTACGGGCGGTCGCGGGTGCCCTCCTCGAACACGCGCACGATCACCGCCTTCTTCC
CCGCGTACCTGCCCTGCAGCAGGATCACCGCCTTGCCGGGCTTCAGGAACTTCACCATCTTCGCTTCCTTCCTCAAGCTGCGCTGCGCCGCCGCCGGTGG
GTTGGGGGAGGGGAGGGGAGGGGAGGGGTCTGTGCCTCGTGCCGAATT
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