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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V4816_all.Contig85
Contig Information
Length 774 bp
Tissue Shoot grown under cold condition for 16days
Clones 2 Clones [Download: CSV  ,  FASTA ]
whv16n12n22    rwhv16n12n22   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0603600 [Oryza sativa (japonica cultivar-group)] >gi|50582685|gb|AAT78755.1| putative phosphodiesterase family [Oryza sativa (japonica cultivar-group)] >gi|108709715|gb|ABF97510.1| Glycerophosphoryl diester phosphodiesterase family protein, expressed [Oryza sativa (japonica cultivar-group)] >gi|113549099|dbj|BAF12542.1| Os03g0603600 [Oryza sativa (japonica cultivar-group)] >gi|125587061|gb|EAZ27725.1| hypothetical protein OsJ_011208 [Oryza sativa (japonica cultivar-group)] >gi|215701296|dbj|BAG92720.1| unnamed protein product [Oryza sativa Japonica Group]
Score 907
Evalue 6.3023e-96
Total Hit Count 361
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V4816_all.Contig85 
GTCGGAATATACCCAGAGATCAAGAATCCTATTTTCATCAACCAGCATGTCAAGTGGTCAGGTGGCAAGAAGTTTGAGGACAAGTTTGTCGAGACGCTTC
TCAAGTATGGCTACAAAGGCAAATATATGTCCGAAGATTGGCTCAAGAAGCCGCTATTCATCCAATCCTTTGCTCCAACCTCACTAATTTACATCTCAAA
CATCACAAATGCTCCAAAACTACTTCTAATAGACGAAACCACAGTTCCAACTCAAGATACCAATCAGTCATACTATGAGATAACTTCGAACGGCTATCTC
GCATTCATAAGCAAGTATGTAATTGGGATTGGGCCATGGAAGGATACAATTATCCCCCCAGAGAATAACCTTTTAGGCCCTGCAACCGATCTTGTGGCAC
GGGCACATGCTCTGAATCTTCAGGTGCATCCATACACATTCAGAAATGAGAACTCATACCTGCACTTCAACTTCCATCAAGACCCTTATGCTGAATATGA
GTACTGGCTCAGAGAGATCAGAGTCGACGCGCTGTTCACCGATTTCACCGGCAGCTTGCGCAAGTACCAGGAGTGGACAGCTCCGCACCAAAACAAAGAA
AAGAAGTGCAGAGGACCTCCTGCATGAGATCGCCCAGACGCTGAAGGTTGATGCTCACTAAAGCTTAGGTTGCCAAGTCTGTATACCTCCTACCTTTGAG
GAGTTATTTCACTGTTGTCAGTACCGAGAAAATGGACTGGTCAATACCATTCTATGTAATTGCTTCCTACAAAT
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