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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig26888  (registered. 2012)
Contig Information
Length 2078 bp
Clones alternative view 624 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 18
Wh_e Seed DPA10 14
Wh_f Spike at flowering date 14
Wh_h Spike at heading date 6
Wh_oh Pistil at heading date 5
Wh_r Root 6
Wh_yd Spikelet at late flowering 9
Wh_CSEC Callus 27
Wh_DPA20 Seed DPA20 9
Wh_EM Dormant seed with water absorption 6
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMP Shoot grown under continuous light 39
Wh_KMV Shoot grown with continuous light after cold treatment 17
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 15
Wh_PCDAM Anther at meiosis 7
Wh_RDr Root of dessiccated seed 14
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 10
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_V483 Shoot grown under cold condition for 3days 10
Wh_VABA Shoot with ABA treatment 8
Wh_VHS Shoot with heat shock treatment 10
Wh_VSCB Liquid cultured tissue 44
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 7
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 7
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 5
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 13
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 10
WH_XN Leaves, plant was grown at constant 23Ž 7
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 8
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 9
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 16
WH_XR Roots, 18 day old plants were grown hydroponically 32
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 36
WH_XT Roots, 18 day old plants were grown hydroponically 33
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 46
WH_SP 9
WH_XA Root 3
WH_XB Root 14
WH_XC Root, treated at 50 microM Al for 6h 11
WH_XD Root, treated at 50 microM Al for 6h 14
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 11
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 6
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XV Leaves, plant was grown at constant 23Ž 4
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|253783729|emb|CAZ76054.1|| glyceraldehyde-3-phosphate dehydrogenase [Triticum aestivum]
Score 673
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig26888 
TTTTTTTTTTAAGAGAGTTAATAGAGTTATCTCTCTATTAAGGCAAACACAAGTACTGGACTGAACGATTTATATATTCTTCACAAACCACAACCAAAAA
AGAGTACTTGATTAGCAACTCCATTACAGATACTAGTTGATGCGGAAAACAGAAGGTAACTCATGTCCAACTAACATGAACCAGGCGTCGTCTGGCGACG
CCATCCACATTTATTCTTCGCATAGACAAAGCAGGGACACCTCTGACCAGGCGCCACAAAGGAAAGCAGAGCACTCTACTGAGTCTTGGCCATGTGGCGG
ATCAGGTCGACAACGCGGTTGCTGTAACCCCATTCGTTGTCATACCACGAGACAAGCTTGACGAAATGGTCGTTCAGAGCAATTCCAGCCTTGGCATCAA
AGATGCTCGACCTGCTGTCACCAACAAAGTCGGTGGAGACCAAATCCTCCTCAACGTAACCCATGATCCCCTTGAGCTTCCCCTCAGATGCAGCCTTGAT
AGCCTTCTTGATGTCATCATATGATGCAGCCTTCTCGGTTCTAACAGTGAGATCAACAACTGACACATCCACAGTGGGAACCCGGAAAGACATACCGGTA
AGCTTGCCATTCAGCTCAGGAAGAACCTTACCAACAGCCTTAGCAGCACCAGTGCTGCTGGGAATGATGTTAAAGCTTGCGGCCCTGCCACCTCTCCAGT
CCTTGCTCGAGGGACCATCAACGGTCTTCTGTGTGGCAGTGATGGCATGAACAGTGGTCATCAAACCCTCAATAATACCGAAGTTGTCATTAATGATCTT
AGCTAGGGGAGCAAGGCAGTTAGTGGTGCAGCTAGCATTTGAGACAATGTTAACGTCTGAGGTGTACTTGTCCTCGTTGACACCAACCACAAACATAGGG
GCATCTTTGCTTGGGGCAGAGATGACCACCTTCTTGGCACCACCCTTCAAGTGAGCAGCGGCCTTGTCCTTGTCAGTGAAGACACCGGTGGACTCCACAA
CGTAATCGGCACCAGCCTCACCCCACGGGATCTCCTCAGGGTTCCTGACGCCGAAGACGGTAACTGGCTTCTCGCCAAAGAGCAGAGTCTTGTCGTCCTT
GAGCTTGATGTCACTGTGCTTCCAGTGGCCGTGAACGGTGTCGTACTTGAACATGTAGGTCATGTACTCGGTGGTGATGAAGGGGTCGTTGACGGCGACG
AGCTCGACATCGTCGCTCTGGAGGGCTACCCTGGCGACGAGCCTCCCGATCCTTCCGAAACCGTTGATTCCGATCTTAATCTTGCCCATGGCGAGGGAGT
GGAACTGCCGCCGCGACGCGAGACGGAGATGGGAGGTTGGCTGGGGTTACCAGGTCCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTCTTGATTC
TATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAG
CCATCCCTCCGCAGCTAGCTTCTTAGAGGGACTATCGCCGTTTAGGCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCC
GCACGCGCGCTACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGCA
ATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGA
TTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGGGGGCGGTTCGCCGCCCCCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGA
GAAGTTCAAGTGCGGATCCAACGTCTTCTGGAAATGGTGAAGCTGGTCGATCTGCCAGGCAATATGGCGAGTGCTGATGTATGTCAGCGCACCGCGTGTA
CCTAGATGTCCAAACTGCGCAAGTGTTTCAACTGTGAAGTTATCGTCGCTGTAATTTTATCATCATCAAGTGGAATTC
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