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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25038  (registered. 2003)
Contig Information
Length 2833 bp
Clones 55 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 8
Wh_DPA20 Seed DPA20 6
Wh_EM Dormant seed with water absorption 8
Wh_EMC Dormant seed with cold treatment after water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 1
Wh_KMV Shoot grown with continuous light after cold treatment 3
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 5
Wh_PCDAM Anther at meiosis 1
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 4
Wh_V483 Shoot grown under cold condition for 3days 1
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 2
Wh_VWD Shoot grown with dessication 1
Homology (BLAST) Top Hit Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|49387779|dbj|BAD26337.1| putative elongation factor 2 [Oryza sativa Japonica Group] >gi|113536503|dbj|BAF08886.1| Os02g0519900 [Oryza sativa (japonica cultivar-group)] >gi|119395216|gb|ABL74569.1| elongation factor 2 [Oryza sativa (japonica cultivar-group)] >gi|125539668|gb|EAY86063.1| hypothetical protein OsI_07431 [Oryza sativa Indica Group] >gi|125582310|gb|EAZ23241.1| hypothetical protein OsJ_006724 [Oryza sativa (japonica cultivar-group)]
Score 3057
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25038 
TCTCTTCCTCCGGGAGCGCCGCCGCTTGCTCATCTCCCACCTCTCGCCTCGGGAGCCGGAAGCGAAACCCCACGGTACTATAGTCCCGGTGTGACATTCA
AAAGCAGTCAAGATGGTGAAGTTCACAGCGGAGGAGCTCCGTGGAATTATGGATAAAAAGAATAATATTCGTAACATGTCTGTTATTGCTCATGTTGACC
ATGGCAAGTCTACGCTTACGGATTCCCTTGTGGCAGCTGCCGGGATTATCGCCCAGGAAGTTGCTGGTGATGTTCGCATGACTGATACCCGTGCAGATGA
GGCAGAACGTGGTATTACAATCAAATCCACGGGTATCTCTCTGTTCTATCAGATGACTCCTGAATCACTTGAGATGTACAAGGGTGACAGGGATGGGGAC
GAATACCTGATCAACCTTATTGACTCACCTGGTCATGTTGACTTCTCTTCGGAAGTGACAGCTGCTCTTCGTATCACTGATGGTGCTTTGGTGGTGGTTG
ACTGTATTGAGGGTGTCTGTGTGCAGACCGAAACTGTGCTGCGCCAAGCTCTTGGTGAGAGGATTAGGCCTGTCCTCACCGTGAACAAGATGGACAGATG
CTTCCTTGAGCTTCAAGTGGAAGGTGAGGAAGCATACCAGACTTTCTCCCGTGTCATTGAAAATGCCAATGTCATCATGGCAACATATGAAGATGTGCTC
CTTGGTGATGTCCAAGTGTACCCGGAGAAAGGGACTGTTGCATTCTCTGCTGGTTTGCATGGGGTGGGGCTTTCACCCTTACAAACTTCGCTAAGATGTA
TGCCTCCAAGTTTGGAGTTGATGAGGCGAAGATGATGGAGAGGCTTTGGGGTGAGAACTTCTTTGACCCAGCCACAAAGAAATGGACCTCCAAGAACACT
GGGACAGCTACCTGCAAGAGAGGTTTTGTTCAGTTCTGCTACGAGCCAATCAAGCAAATCATCGCCACCTGCATGAATGATCAGAAGGATAAGTTGTGGC
CTATGTTGAAGAAGCTGGGTGTGACCATGAAGAATGATGAGAAGGACTTGATGGGCAAGGCTCTCATGAAGCGTGTGATGCAAACTTGGCTGCCTGCCAG
TCGTGCTCTGCTTGAGATGATGATATTTCACCTTCCCTCTCCCTCAAAGGCACAGAGGTATCGTGTGGAGAACTTGTACGAGGGTCCCCTTGATGATATA
TATGCTAATGCTATCAGAAACTGTGACCCTGATGGTCCTCTTATGCTGTATGTCTCCAAGATGATTCCAGCATCTGACAAGGGTAGGTTCTTTGCCTTTG
GACGTGTTTTTGCCGGGAGGGTTGCAACTGGTATGAAGGTCCGTATCATGGGTCCCAACTTTGTTCCTGGCCAGAAGAAGGATCTGTATGTGAAGAGTGT
CCAGCGTACTGTTATCTGGATGGGAAAGAAGCAAGAGTCTGTTGAGGATGTTCCCTGTGGTAACACTGTTGCTTTGGTTGGTTTGGATCAGTTCATCACA
AAGAATGCAACCCTGACAAATGAGAAGGAAGTTGATGCCTGCCCAATCAGGGCAATGAAGTTCTCTGTGTCCCCTGTTGTGCGTGTTGCTGTTCAGTGCA
AGGTGGCCTCTGATCTTCCCAAGCTTGTTGAGGGTTTGAAGCGTCTGGCAAAGTCAGATCCTATGGTTCTCTGTACCATTGAGGAGTCTGGTGAGCATAT
CATTGCTGGAGCTGGAGAGCTTCACCTTGAAATCTGTTTGAAGGATCTTCAGGATGACTTCATGGGTGGTGCTGAAATCATTGTTTCCCCTCCCGTTGTC
TCCTTCCGTGAGACTGTTCTGGAGAAGTCCTGCCGTACTGTCATGAGCAAGTCCCCGAACAAGCACAACCGTCTTTACATGGAAGCTCGCCCCTTGGAGG
AGGGACTGGCTGAGGCCATTGATGATGGTCGCATTGGCCCACGTGATGATCCTAAGGTGCGGTCCAAGATCCTGTCTGAGGAGTTTGGGTGGGACAAGGA
TCTTGCCAAGAAGATTTGGTGCTTTGGACCTGAGACGACTGGCCCCAACATGGTCGTCGACATGTGTAAGGGAGTGCAGTATCTTAATGAAATCAAGGAC
TCTGTTGTGGCTGGTTTCCAGTGGGCGTCAAAGGAAGGCGCGTTGGCTGAGGAGAACATGCGTGGCATTTGCTTTGAGGTCTGTGATGTTGTTCTCCACA
CTGATGCTATCCACAGGGGTGGTGGTCAGGTCATTCCCACGGCCAGGAGGGTCATTTATGCTTCTCAGCTGACTGCCAAGCCAAGGCTGCTGGAGCCTGT
GTACCTGGTTGAGATCCAGGCCCCGGAGAATGCGCTTGGTGGTATCTATGGTGTTCTGAATCAGAAGAGAGGGCACGTGTTCGAGGAGATGCAGAGGCAA
GGTACCCCGCTCTACAACATCAAGGCCTACCTCCCCGTCATTGAATCCTTTGGGTTCTCAAGCACCCTGAGGGCCGCGACGTCCGGCCAGGCCTTCCCCC
AGTGTGTGTTTGACCACTGGGACATCATGGCTTCTGATCCTTTGGACCCAGGCACCCAGTCGGCGACGCTCGTCACGGATATCCGCAAGAGGAAGGGCCT
CAAGGAGCAGATGACCCCTCTATCCGATTTCGAGGACAAGCTCTAAATTTTTGGTGCTGTTATCCCTTACCTGGTCTTGTGTTGTTAAAGAGAGCTGCAC
TATTTTGTATCGATGAGTCTTGCTGTTATGACCTACTTGTCGTGATACTGGGAACTATGTTTTGATGTCTGGTGATGTAACGGATGTTTTACTTAGATTA
TCTATCTGTTGTCCACTGGTTCTAAAAAAAAAA
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