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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig17252  (registered. 2012)
Contig Information
Length 1237 bp
Clones alternative view 4 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XF Seedling, infected with leaf rust 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115464459|ref|NP_001055829.1|| Os05g0474900 [Oryza sativa (japonica cultivar-group)]
Score 518
Evalue 6.00E-145
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig17252 
GGCTGCACCAACCTTCCGCGCTGTCTTTTCNNNNNNCTAGCCGACACGGCGGCGGCGGCGGCGGGAGGAAGGCAAGGATCTCGACCTTTGCTTGAGCGCC
AGAATTTGGTGGCCAATGCCCAGTTCATATAAAGATTACAGTACAGCAACCGATCCTGTGGAACATGGAACTTCAAGTCCGATAGTAAAATAGCTTGCTC
TTGTTTCGCGAAGGAGGTTAAGACTGCTTCTACATTCTGAAGACTCCTACTGAACAAAATGGTCCCTAATGGTAATGGAAACCTCAAAGCTGATACTCAA
CAAGTAGAGTCAAAGACATCAGAAAATGATCCCGGAGTCACAGATGTCAACAGTCTTTCCACTCAAAATGTTTCAAAACAGGGAAATCAACGGAGTGGGT
GCCTCAACTTTGTGAATCGCTTTTCTAGTGGTGCCCACTTTAAGAAGCTGGGTCCTTCTCCTTCAGTCAAGTTTCGACAGCTTGCACTTCAGCGTGATGA
TTTTTCACGTTCAATCCATTCTGACAACCATGACAATCACGAACATTTTCGATTAATCAGGAAAATTAACTGGGGTCATCTGTGGGCAATGGGCAAGGAT
TGGATAAGGCAGCCCCTTAACATGGCCCTTTTTGTCTGGATTGCTGTTGTTTCTGTATCTGGTGCAATACTCTTCATGGTTATGACCGGGATGCTGAATC
ATGCTTTGCCTAGCAAATCAGAAAGAGACGCCTGGTTTGAAGTGAACAACCAAATTTTGAATGCATTATTCACACTCATGTGCCTTTACCAACACCCGAT
GCGGATCTATAACTTTGTGCTCTTGTGTCGATGGGACCAAAAGGACATTTTAAGGCTTAGGAAAGAATACTGCAAAAATGGGACATATAAGCCTAATGAG
TGGATGCACATGATGGTGGTTGTGGTCTTTCTTAATCTGAACTGCTTCGCCCAGTATGCCTTGTGTGGTCTCAACATAGGGTACCGCAGATCTGAAAGGC
CTCCCCTTGGTGTCGCCGTGACTATTTCTTTTGCATTTGGGGCTGCGTTATTCGCTAGTGTGTATAACATTGTGAGTCCTCTTGGGAAGGATTATGATGC
AGAGCTGAGAGAAGGTGATCCAGAAGCACAAGCCGGGGTCACATCAACTGAAGGCGCCAGGCCAGCAACTTCAGGGAGGTCACTTGAGAGAAGATACTCT
TTTCTTCAAAGCGACGAGCGCCGTTTCGTGGAGAGCA
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