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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig3064  (registered. 2012)
Contig Information
Length 1346 bp
Clones alternative view 170 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 4
Wh_f Spike at flowering date 4
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 3
Wh_r Root 5
Wh_yd Spikelet at late flowering 4
Wh_SH - 2
Wh_CSEC Callus 4
Wh_DPA20 Seed DPA20 1
Wh_EM Dormant seed with water absorption 1
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_KMP Shoot grown under continuous light 3
Wh_KMV Shoot grown with continuous light after cold treatment 1
Wh_MS Seed DPA5 of DT3DL CS wheat 9
Wh_PCDAM Anther at meiosis 5
Wh_RDr Root of dessiccated seed 2
Wh_SHDr Shoot grown with dessication 1
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VABA Shoot with ABA treatment 2
Wh_VSCB Liquid cultured tissue 3
Wh_VWD Shoot grown with dessication 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 8
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 8
WH_XA Root 32
WH_XB Root 12
WH_XC Root, treated at 50 microM Al for 6h 13
WH_XD Root, treated at 50 microM Al for 6h 7
WH_XE Seedling, infected with leaf rust 10
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115462609|ref|NP_001054904.1|| Os05g0208000 [Oryza sativa (japonica cultivar-group)]
Score 554
Evalue 1.00E-155
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig3064 
ATAAAAGCGCAACGGCACCCAGCGATCTAGGCCTCCTCCTCGCTCACATCGCCTTACCTCGGCTCGCGTCTGCTACACTTCCTCTCCCGGCCCGGCTAGA
TCTCGCCGGCAGGAGATGGCGGACGCGAAGCAGCAGCAGGCCGCGGCGCCCACCGGCGTCTGGAAGACGATCAAGCCATTCGTCAATGGCGGTGCCTCCG
GGATGCTCGCCACCTGCGTCATCCAGCCCATCGACATGATCAAGGTGAAGATCCAGTTGGGTGAGGGATCTGCAGCTCAGGTCGCAAAGACCATGTATGC
TAATGAGGGCCTTGGTTCCTTTTACAAGGGTTTGTCAGCTGGTTTACTAAGGCAAGCGACCTATACGACAGCTCGTCTTGGATCCTTCAGGGTTTTGACA
AACAAAGCAATTGAGGCAAATGATGGGAAGCCATTGCCACTTGTTCAGAAAGCTTTTATTGGTCTGACTGCTGGAGCGATTGGCGCATGTGTGGGCAGTC
CTGCTGATTTGGCACTCATTAGGATGCAAGCTGACTCGACCCTACCAGCAGCACAGCGGCGTCACTACAAGAATGCATTCCATGCACTCTACCGTATCAC
CGCTGATGAAGGCGTCCTTGCGCTTTGGAAGGGTGCAGGCCCAACTGTGGTGAGAGCCATGTCACTGAATATGGGTATGCTTGCGTCCTATGATCAAAGT
GTTGAGCTGTTCAGAGACAAATTGGGTGCCGGAGAATATCAGACTGTTATTGGAGCCAGTGCCATTTCTGGATTCTGTGCGGCTGCTTGCAGTCTGCCCT
TTGATTACGTGAAAACACAAATTCAGAAGATGCAACCTGATGCCACTGGCAAGTACCCATACACTGGGTCTTTGGACTGCGCCATGCAAACCTTGAAGAC
CGGTGGCCCATTTAAATTCTACTCCGGCTTCCCTGTATATTGTGTCAGGATCGCCCCGCATGTCATGATGACGTGGCTCTTCTTGAATCAAATCCAGAAG
TACCAGAAGAAGATCGGCATATAAGATCTCCAGTTGGGGACAAGAGTACCAATCCTTATTCAACACATTTAATAACTTTCCAGCAGCTTTGCACTCCCGT
GGTTGTTTTTGGTAGACAGAGTTTTAAGCAATTTTTACCGTAGCTTACATTTGCTGTGGTACTCTTGACGTTGTTACAATAATCACATAATCACATTATT
TGTTGTAATTGGGGCAATTTTATTGGCGGGCATACTTCTGTAGGTTGGGCACAGCCATGAGACAATACTACTACCTGCTTGTGCCATCTTGTCTTGTATG
GTATGTGCTCAATTTTATCTGTGGCTCGAAAAAATAAATCCTTTCT
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