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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig31319  (registered. 2012)
Contig Information
Length 831 bp
Clones alternative view 292 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 7
Wh_e Seed DPA10 2
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 6
Wh_r Root 1
Wh_yd Spikelet at late flowering 3
Wh_SH - 2
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 3
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_KMP Shoot grown under continuous light 6
Wh_KMV Shoot grown with continuous light after cold treatment 10
Wh_MS Seed DPA5 of DT3DL CS wheat 13
Wh_OKCS Seed DPA5 10
Wh_PCDAM Anther at meiosis 2
Wh_RDr Root of dessiccated seed 8
Wh_SHC Shoot grown with cold treatment 5
Wh_SHDr Shoot grown with dessication 3
Wh_V483 Shoot grown under cold condition for 3days 5
Wh_VABA Shoot with ABA treatment 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 8
Wh_VWD Shoot grown with dessication 4
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 3
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 7
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 4
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 3
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 7
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 6
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 12
WH_XT Roots, 18 day old plants were grown hydroponically 6
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 6
WH_SP 14
WH_XA Root 22
WH_XB Root 9
WH_XC Root, treated at 50 microM Al for 6h 18
WH_XD Root, treated at 50 microM Al for 6h 10
WH_XE Seedling, infected with leaf rust 11
WH_XF Seedling, infected with leaf rust 15
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 7
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115456241|ref|NP_001051721.1|| Os03g0820600 [Oryza sativa (japonica cultivar-group)]
Score 206
Evalue 2.00E-51
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig31319 
TTTTTTTTTTCCAACAGATATGCAGCAGATAGACTGCCATGCTGAATTACATTTTTTTTTTTTGACGAATCCAAACAGAACATTTAATTATTTATAACCG
TAACTTGGAGGAACAGTGCAGTGCAGCAGCATAAGGCCCGGCATATAAATGGGCAGAAGAAAAAGAACAGATTACATGATAGAGCAAGCCCTCCGTGGTC
ACACGGACCACGGGAGGAGGGCCTTTCGACACGGTAACAAAGCCACAAATCATCAAGAAAGTTTCAAGAGTCACACCGCCAAATCTATATTTGACATAAA
TCCATATTGCGAGGCATTGGGATGATTTGCCTTAGTGCGCGCGCTCCTTGATCACGTCCAGGCTGATTTCGCTGGGGTCAGTGGCCTGCATCTCGATCTG
GATGCCGTCCAGGGTCCTCTTGAACTTCTCGTTGGTGCTCGCGTACGTCATCTTGCTCCTCACCTTTGCGGTGTCCGGGGACCAGAAGATATAGAAGATC
CTGCTCTTTGGCACATCCTCCGGGGTGGTGAAGTCGAAGTCGAACACCGCGAATCGGCAGTCATTCTCAGGGAGGGTCTTGGTGAAGTCCTCATAGGTGG
CCTCGCGCTCCCCAGTTTGGTCCACAATGACCTCCTTCTGGTTCTCCAGCCTGTAGGTTATGAAGCGGTGCATCCTCTTGGACTTGAGCTCCACAAACCT
CAGCTTGCAGTCATCATGGATCCCAGCTCCGGATGATGCGTTTGCCATTGCCGAGCTCGGGAGGGGAGGGAATCCGCCGGGGAGGGGAAAGGGGTGGATT
GCTGGGGGTGGAGAGGGTTGTGTGCTGCCTC
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