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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_VABA_all.Contig1482
Contig Information
Length 1831 bp
Tissue Shoot with ABA treatment
Clones 25 Clones [Download: CSV  ,  FASTA ]
whva11g23    whva12d16    whva12k23    whva16o09    whva2n20    whva4k04    whva4p14    whva8g08    whva9d13    rwhva15e16    rwhva16g06    rwhva16o09    rwhva16o11    rwhva11g23    rwhva12d16    rwhva12e15    rwhva12k23    rwhva13f05    rwhva2n20    rwhva4k04    rwhva4p14    rwhva7c14    rwhva8g08    rwhva9a21    rwhva9d13   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|15408889|dbj|BAB64280.1| putative delta-1-pyrroline-5-carboxylate synthetase [Oryza sativa Japonica Group] >gi|113534333|dbj|BAF06716.1| Os01g0848200 [Oryza sativa (japonica cultivar-group)] >gi|215715215|dbj|BAG94966.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218189375|gb|EEC71802.1| hypothetical protein OsI_04432 [Oryza sativa Indica Group]
Score 2282
Evalue 0
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_VABA_all.Contig1482 
ACAGCTACTTCATATATGGTAGCATAGAATGTACCGATGCAATTCTACAGTTACAACAACTAGTGCCATAACTAGGACATTGTATGGATAAATCATTGTA
CACGAACAATCACGGAACTAGATAGCGACATAGTAACAACAATGCTCTCTTGTCTTTCTTCATTCCTCGCACAGAGAGAAGGGGGCTTTGAAGAGGATTA
TTCTACAAAAATTGCTCTACAGCAGGAATCCTCTACCCTCATTGCAAAGGAAGATCCTTGTGGGTGTACACAACTCCCTTGTCGCCGTTCACTACTTGTC
CACTCCCTCGAAGAATGCACCGAGTGGTTAAAAGACCGTCGACACCAACAGGTCCACGAGCATGTATGCGCCCTGTACTTATGCCAACCTCTGCACCTAG
ACCGAAGCGAGTCCCATCACAGAACCTTGTGCTTGCATTATGGAACACAGCAGCACTGTCAACTTGTTGTAGAAAAGTATCTGCTGACTTCTTATCAGTT
GTGATAATACAATCTGTGTGTGCACTTCCATAACGATTTATATGGTCAATCGCTGACTGCACATCATCAACAAATTCGAGGGTGCATGCCATTGAGCTAT
ACTCATGATGAAATGAATCCACCTTTGGTACTTTCAATGTGTCATGTGCGACAGGCCCACCATAAATAACAACTCCTTCTTTCGCAAGTTCCATCAATAA
ATCATCAAGACCCTCTGTCTTGTTCAGATCTTTATGAACAAGTAGTGTTTCCATAGCATTGCATGCTGCAGGATAATCAACCTTTGCATCCAATACGATA
CGTTTTGCCATGTCCATGTCAGCTGATTTATCAATGTAAACATGGCAGATACCATCAGCATGACCAAGAACGGGAATCTTGGTTTGTGCTTTGATTTGAG
AAACAAGCCTGTTACTGCCTCTTGGAATAACAAGATCAATCACATCGTCAAGCTTTAGAAGATCAGCAATTTCATCTTTGCTTTTCACAAGGCCAATAAG
CTTTTTACCAACAGCATCTGGAATCACGCTGGTTATGACCTTATGTAATATTGTGTTTGATCTCATAGCTTCTTTTCCTCCTTTCAGAAGAAGGCCATTT
CCACTTCGGATTGCTAGAGCTGCAATCTGGACCAGGGCATCAGGACGAGACTCAAAAATAATTAGGAGAACACCCAATGGGCAGTACATCTTCTCGAAAA
CTAAATCCTTAGCAACCTCTGTTTTTTTCAGTGTATGTGAGATAGGGTCCTCCATGTCCGCAATTGCACGGATCGATTCAGCAAGGCTTGTTATCTTTCC
TGCCTTCAGGGTCATCCTAGCCACCAAGGATTTCTCATAACCTGAATCTTGTGCCGCAGCTAGATCAGCTTCATTCTCGGATATAATTAAATCCACATTT
GCATCCAGAGCACCGGCAATATCTAGCAAAATCTTCTTACGCTCCTCCGATGACAAATTCTGGAGATGCCGTGAGCAATCTTTTGCAGCAACTGCCATCT
CACGGGTTGTCACCTCCTTTGAACAATCCCAGACATTTGCTTCATTATGGAAAAGTGTACCAATTTTCTCTCCTCGCATAATCTTAATAATGCTATCTGT
TACAAATCCACTTGCAATTACAGCAGGTACGCCCTTTGATGCAGCAGTAACAGCAGCTGCCACCTTAGCTTGCATTCCACCTCTTCCCACACGAGACTTC
TCCCCAAAATTAATTAGCTTCCCGTGTTTTTCATTAATGTAGGTGTGGATAATCTTTGATTGGGGATCGCTCGGTGGACCACTATAGAGTCCCTCCACAT
CACTAAGCATGATAAGAAGCCTCGTGCCGAA
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