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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_SHDr_all.Contig74
Contig Information
Length 741 bp
Tissue Shoot grown with dessication
Clones 2 Clones [Download: CSV  ,  FASTA ]
whsd11m01    rwhsd11m01   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Derlin-1; AltName: Full=DER1-like protein 1; AltName: Full=OsDerlin 1-1; AltName: Full=18 kDa cold-induced protein >gi|215769299|dbj|BAH01528.1| unnamed protein product [Oryza sativa Japonica Group] >gi|218196225|gb|EEC78652.1| hypothetical protein OsI_18749 [Oryza sativa Indica Group]
Score 713
Evalue 1.80906e-73
Total Hit Count 330
Registered year 2003
Contig Sequence     [ Download ]
>Wh_SHDr_all.Contig74 
GGGTTCATTTGAGAAGCGGACAGCAGATTTCTTGTGGATGATGATATTTGGTGCAATCTCGTTACTGGTACTGTCTGCTATTCCCTATCTCGAGACTTAT
TTGTTGGGTATTCCTATGGTTAGCATGCTTCTTTATGTCTGGAGCCGAGAGTACCCAAACTCTCAGATAAGCATGTATGGCCTCGTCCAATTGAGGTCAT
TTTATCTACCATGGGCTATGCTTGGATTGGATGTGATATTTGGCTCTCCAATATTGCCTGGCCTTTTGGGCATTATGGTTGGACATCTGTACTACTTCTT
TACAGTGTTGTATCCGCTAGCTAGCGGAAAGAACTACCTCAAGACTCCTATGTGGGTACACAAGATTGTTGCTCGATTCAGGTTGGGCGTGCAGGCAAAC
TCTCCAGTCCGGCCAGCTAACACAGGCCCTACTGCCTTCAGAGGAAGAGGCTATAGACTCAATCAGTAGACTGCTGCGACGCCTGGCGATGTACAAGAGG
CATGAACAGGTTAACATGGATTCGATCTAAACTCTGTGGCAGCTCTAGGAATCTGGGTTGGGATTTTTCCCATTGAATCTGTAATGTCCTCATCGAATAA
CTACAGATGTGCACTTGCATTGTACCTGCGAAGTAGAGCTGCATGTCTTCTCTTTCTTTTTTAATACTCCCTCTGATACATATTACTTGTCGCTCAAATG
GATCTAGATACATCTATTTGAACGACAAGTAGTATGGATCG
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