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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5733  (registered. 2012)
Contig Information
Length 908 bp
Clones alternative view 29 Clones [Download: TSV  ,  FASTA ]
Wh_r Root 2
Wh_SH - 4
Wh_EMI Dormant seed with water absorption after breaking 3
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 4
Wh_PCDAM Anther at meiosis 2
Wh_V4816 Shoot grown under cold condition for 16days 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 1
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 4
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|242053579|ref|XP_002455935.1|| hypothetical protein SORBIDRAFT_03g027560 [Sorghum bicolor]
Score 325
Evalue 3.00E-87
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5733 
AAAATGATGTCTCAGTGATGCAGCCAAGGTAATCGTGTTCTCAAAGTAATGTTAAACCTCAATGAAAATGAAGAACACAATTACCTTTGATGTCTCAGTG
ATGCAGCCAAGGTAATCGTGTTCTCAAAGTAATGTTAAACCTCAATGAAAATGAAGAACACACTGCAACAAGATCACAACTCTGTCACAAGAGCAGGGAC
GGTGTCTGCTCATTTCTTTGTAGCAGCCTGGCCGATAAATTTGGTAAGAACATAGCAATCCGGTGGAGTGATGTTCGTATAGTAATTATGTATCGTCTCT
GTTATTTCGAAACCAAACTTCTTGTAGAAAGCAATGGCATCGTCGTTGTTTGTCTGAACGTGTAAGTATATCTCTGAGATGTTCTGCTTCGCACAGAGAT
CAAAAACATGGTTCAGCAGCTTTGTTCCAAGACCAAGACCACGGTAGGGCGCCAATACACCCAGAGTCATGATATAAACACGGACCACCCCTCCTTCCTT
CTTCTCCAGGCGACAAGCGATTGCTCCAACACATATATCACTATAGTAAGCGAGCTTGGAGAAGTCCTTGGAGGCGATGGCGTCCTGGTAGTATTTGTCG
TTGTAGCGGACGGGGAAGAGCGCCATGTTGAGCTTCTTGAGCTGCATCACGTTCTTGTCCCGCAGGCCGTCCAGGGACGTCCGGGCGACGCCGCTGCTCT
TCTCCTTGCTCCCAGCTGCCTCTCCTTCCCCAGCGCCCATCCTCCAAGCCCTATTGCCGTCCCTCGCCCTCGCTCTCTTCGTCGCCTCTCTCGAGACTCG
AAAGTTTGCGTGCGATGCGACCACGGCGGCGGGTGCGACTCGCGACCAAAACCCTTCCGCTCTTTAGCTGTTTTCGCTACTTCTTCCCGTTCTCGCTGAC
CCGTCGGG
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