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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1121  (registered. 2012)
Contig Information
Length 1528 bp
Clones alternative view 261 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 7
Wh_dL Crown of seedling 12
Wh_e Seed DPA10 3
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 7
Wh_r Root 9
Wh_yd Spikelet at late flowering 2
Wh_CSEC Callus 22
Wh_DPA20 Seed DPA20 6
Wh_EM Dormant seed with water absorption 7
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 3
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 8
Wh_PCDAM Anther at meiosis 3
Wh_RDr Root of dessiccated seed 4
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 2
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VHS Shoot with heat shock treatment 2
Wh_VSCB Liquid cultured tissue 9
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 4
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 4
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23Ž 7
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 12
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 5
WH_XR Roots, 18 day old plants were grown hydroponically 6
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 13
WH_XT Roots, 18 day old plants were grown hydroponically 8
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 4
WH_SP 13
WH_XA Root 4
WH_XB Root 11
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 3
WH_XE Seedling, infected with leaf rust 9
WH_XF Seedling, infected with leaf rust 4
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 5
WH_XV Leaves, plant was grown at constant 23Ž 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 2
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|16903082|gb|AAL30396.1|AF433653_1|AF433653_1 small Ras-related GTP-binding protein [Triticum aestivum]
Score 464
Evalue 2.00E-128
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1121 
GTGGTACTGTAAAATAATGAACAAGTAAAGAGCATACTATGATCACTTGCCCTGCACATCATTGAGTTCATCACTCCTGCTGGACGATGAGCTTGGATGC
ATCCAGGGAGCCCAGCCTCACAGCACAGTCGATGCTTTCGTCTAGTATCTCCTCAACCCCGTACTTGTACCTGAAGCCCAGTTCCCAAAGCTTGCTCCTC
TCGGGGTGCACCCTGGCTACTTCATCAGTCTCTCTGAGGACTTCAAGGTGGGGGTACTTGCTGCTGTAGTGGTCTAGGATGTCGAGGGTCGTCGGGTAGG
CGGCGGCACAGAGGAACCGGCCGGAGATGGAGGGCTGCTCCATGCAGAAGATGAGCGCAGCGCAGACGTCGTCGACGTGCACCAGCGGCACCGAGCCCAG
CAGCCTCTGCAGGATCCTCGCCTCGTGCCGAATTCGGCACGAGGCCGATTCGAAATACTCCTTCCCCAGCTAGGGTTTTGCTGCCTCCGCCGCCGCCTCC
CGCCAGCGTCGTCCCCCCATGGCGCTGCCGAACCAGAACACCGTCGATTACCCCAGCTTCAAGCTCGTCATCGTCGGCGATGGCGGGACTGGCAAAACCA
CTTTTGTGAAGAGGCATCTCACTGGAGAGTTTGAGAAGAAATATGAGCCCACTATTGGTGTTGAAGTTCACCCATTGGATTTCACCACTAACTGTGGAAA
GATCCGTTTCTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGCCTTAGGGATGGATACTATATCCATGGTCAGTGTGCGATAATCATGTTTGAT
GTCACTTCAAGGCTGACATACAAGAATGTTCCTACGTGGCACAGGGACTTGTGCAGGGTGTGTGAGAACATCCCCATTGTCCTGTGCGGGAACAAGGTTG
ATGTGAAGAACAGGCAGGTTAAGGCCAAGCAGGTGACATTCCACAGGAAGAAGAACCTGCAGTACTATGAAATCTCTGCCAAGAGCAACTACAACTTTGA
GAAGCCCTTCCTTTACCTTGCAAGGAAGCTGGCTGGTGATCCCAACATTCACTTCGTCGAAGCTGTGGCCCTTAAGCCCCCGGAAGTGACCTTCGACCTG
GCCATGCAGCAACAGCACGAGGCTGAGCTTGCGGCTGCAGCGGCACAGCCACTGCCTGATGACGATGACGATCTGATCGAGTAGAGAGAGGATCATGAGT
CTTGTCTGTCTTATCAATCAATACTTTGAGAGCCAGAGACTGTGCGAGTCGGTTTTAGGTTGAAGGCTTGATTTGGAGTAGTCAAGCCGGATGTTTTTCC
TGTCTGCCTTGCCTTGTCTGGTGGGCTGCAAACTGTTTGTGTGACATTGATCTACATCATGTTGCTTGCCATGGATTTGTTGTTGGCCACCTTGATGGTT
CATCAGTATTATTATGCCTGTTGGCTCAATGTGTGGATCATATATTTATCTTGATCATCTGTGTGCTTGCTATGCGCATCGTTTTGGGCTAAATAGGTTA
GCTGCTGGACATCTCAATGGCCAGGTAA
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