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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig425  (registered. 2012)
Contig Information
Length 1093 bp
Clones alternative view 267 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 25
Wh_dL Crown of seedling 13
Wh_e Seed DPA10 6
Wh_f Spike at flowering date 3
Wh_h Spike at heading date 2
Wh_oh Pistil at heading date 2
Wh_r Root 7
Wh_yd Spikelet at late flowering 12
Wh_CSEC Callus 9
Wh_DPA20 Seed DPA20 5
Wh_EM Dormant seed with water absorption 12
Wh_EMI Dormant seed with water absorption after breaking 10
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_MS Seed DPA5 of DT3DL CS wheat 9
Wh_OKCS Seed DPA5 7
Wh_PCDAM Anther at meiosis 6
Wh_RDr Root of dessiccated seed 3
Wh_SHC Shoot grown with cold treatment 9
Wh_SHDr Shoot grown with dessication 1
Wh_V4816 Shoot grown under cold condition for 16days 3
Wh_V483 Shoot grown under cold condition for 3days 8
Wh_VSCB Liquid cultured tissue 9
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 2
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 6
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XR Roots, 18 day old plants were grown hydroponically 3
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 3
WH_CA 8
WH_SP 5
WH_XA Root 14
WH_XB Root 19
WH_XC Root, treated at 50 microM Al for 6h 15
WH_XD Root, treated at 50 microM Al for 6h 9
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|119638443|gb|ABL85034.1|| ribosomal subunit 8E protein [Brachypodium sylvaticum]
Score 411
Evalue 6.00E-113
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig425 
GGCTGCAGGAATTCGGCACGAGGAGCTGCGGCGGCGCGCGCATAGGAGGCGAAGCAGCAGCGGAGCCAAGCCACCGACGCCACCATGGGTATCTCGCGTG
ACTCCATGCACAAGCGCCGGGCCACCGGTGGGAAGCAGAAGGCGTGGAGGAAGAAGCGAAAGTATGAGCTCGGCCGCCAGCCAGCCAACACTAAGCTTTC
GAGCAACAAGACAGTGAGGAGGGTCCGTGTTCGCGGAGGTAACGTGAAGTGGAGGGCTCTCCGTCTGGACACTGGTAACTTCTCATGGGGTAGTGAGGCT
GTGACCCGCAAGACCCGTCTCCTGGATGTGGTTTACAATTCGTCAAACAATGAGCTTGTGAGGACTCAGACCCTTGTCAAGAATGCCATTGTGCAAGTTG
ATGCTGCCCCTTTCAAGCAGTGGTACCTGACTCATTATGGAGTGGAAATCGGTAGGAAGAAGAAAGCTGCTGCAGCTGCCAAGAAGGATGCTGCTGAGGG
ACAAGAGTCTGAGGTTGCTGCTGCTGCCACAGAGGAAGCAAAGAAGAGCAACAATGTCCAGAGGAAGCTTGAGAAGCGCCAGCAGGGACGTACACTGGAC
TCTCACATTGAGGAGCAGTTCAGCGGTGGAAGGCTGCTGGCCTGCATTTCGTCTCGCCCTGGACAGTGTGGCAGAGCTGATGGGTACATCCTGGAGGGCA
AGGAGCTGGAGTTCTACATGAGGAAGCTCCAGAAGAAGAAGGGCAAGGGTGCCACAGCTTAGGCTGAAGAGCTGCTGCATGTTACTTGTTGGATTTTCTT
AGATGTTGCGTCCATGTCATGTTTGCAGACATACTGAACACCATTTTCTGTAAACTGTTCGAGTCCTAGGTTGAACTGAGAATGTTTTTCCTGTTTTGGT
TGTGATCTAAAGCTATCCAGATTCTATTATGTGTTGTTCTACCTTGCAGTATTTTCATCTGTTCAGTGAAATAATGTTCTCGCATCTCCATGTTGATTTG
ATGCAAGTTTTGCCTTCCATGATGTAGTTTGATATGTGTGGTTTTTGCAGTTGCAAATGAACTTCATCGTATCTGAATTCCTTAAAAAAAAAA
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