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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig6712  (registered. 2012)
Contig Information
Length 857 bp
Clones alternative view 99 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 4
Wh_dL Crown of seedling 14
Wh_e Seed DPA10 4
Wh_h Spike at heading date 4
Wh_r Root 6
Wh_yd Spikelet at late flowering 3
Wh_CSEC Callus 2
Wh_DPA20 Seed DPA20 5
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_KMV Shoot grown with continuous light after cold treatment 4
Wh_OKCS Seed DPA5 4
Wh_RDr Root of dessiccated seed 2
Wh_SHC Shoot grown with cold treatment 5
Wh_V483 Shoot grown under cold condition for 3days 2
Wh_VSCB Liquid cultured tissue 4
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XT Roots, 18 day old plants were grown hydroponically 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 4
WH_XA Root 10
WH_XB Root 1
WH_XC Root, treated at 50 microM Al for 6h 8
WH_XD Root, treated at 50 microM Al for 6h 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115442401|ref|NP_001045480.1|| Os01g0962600 [Oryza sativa (japonica cultivar-group)]
Score 334
Evalue 7.00E-90
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig6712 
GGTTTTTTTTTTAAATAGCAAGTTGACCATCTTTAGATTCTCAGTCGACCAACATCTGTCTTAATATCAAAGAGCTCATTCTAACACAAACGAACCCATA
AACCATGGTCTTAAGCTACAATCTCGATAAACAAAATCATCGCAGTGTTTGCAGAATTCAAACATCAACAGAGAGGACAGCACCCCACGCGCGCATTGGA
TCTGAAGACCTGTTGGGTGCTCCCACTTGCTGAAGAGTCGCTTCTTCACTCCATGGTAGCTCCAGAACCAAAAGTGCCGCCGCCGCCTCCACGGCCAAAG
GGCCTGGCAGCACCACCAGCACCCCTGAAAGCTGGCTGGTACTCAGCAGGAGCTCCACCCTTCTCACCAGCAAAATCCCCTGGAGCACCACGTGGGCCTC
CTCTGTAACCATCCCTGTCACCATACCTGGGCCTGTCACCCTCAAAACGAGGAGGACCCCTGGGGCGGTCACCCGGTGGGCCAGAGCCGAAGGGGCGGGA
CGGGGGCTTGGCGGACTTCTTGAGGGTGTTGGGCACAATCTCAGACGGCAGGTTGAGGAAGGTGCGTAGGAACTCAATGCCGTCGTTGGTCAGGTACCAG
TAGTAGTGCTGCCACGAGAAGGTCTCCCTGACGTACTCCTTGGACTTGAAGCTCTGCATGAGCTTGATGACCTCCAGGTTCGAGGCATCGACCTGGGGGT
GCTTGGCCAGGTTGTAGTCCTTCTTGGCGTACAAGACTCCCTCCTGGAAGAGGTACTTGCAGATCTCGCGGCGGTTCTTCTTGGAGATGATCATGGTGAC
GGGCGGCGGCGGGGACGGAGACGGCGTGCAGGGGAGCGGGAGGCGGAGCGCGGCTGC
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