Home About update informationSite map Contact Us
Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig403  (registered. 2012)
Contig Information
Length 896 bp
Clones alternative view 17 Clones [Download: TSV  ,  FASTA ]
Wh_dL Crown of seedling 1
Wh_r Root 1
WH_XI Two-week old seedlings（22℃ 16L-8D） 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 1
WH_XR Roots, 18 day old plants were grown hydroponically 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XA Root 1
WH_XB Root 5
WH_XC Root, treated at 50 microM Al for 6h 2
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|125546496|gb|EAY92635.1|| hypothetical protein OsI_14379 [Oryza sativa Indica Group]
Score 325
Evalue 3.00E-87
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig403 
GCACCACAATAAAATCTTTATCACGGCACATCAAGCTGGAATAAGTACAAAATCATATGTTTTGTCTATTGTCATGAAATGAATAATAACAATATTCCCA
TTGTAACAAGATTGCGATCAATGTGAATGATAAGACATTCATGATAGTAGTAACAACCCCCTAATATTCTCTACATAGCTGTGCAAGAAATGCTTGAGTC
ACTCAGAGTTGCCCTGCGATTCGCAGCAGTACTTCTGCGTGCAGAGAAATGCCCACAATTTCCGCTGATCAACACCTCACAGAATTCTGTCGAGGTCGGT
GATGAAATTCGAGGCAAAAGATGTCAGCTTTTTTCCGGTTTCTCCGGCCATGTTCTTCAGAGATGATAAATCCTGGGAAGCCTGGAAAGATATTCTGTTG
ATGAGATCTGCAGCACTTGCGTCCAGATCAGAATCATTTGTATCACGGCCAAACAGATCAGCGCTTGAAATGGATGATGAACCCGAAAACTTTTGAAGAG
ATAACTGAGCCTCCTTTTGCTCTCTGTCTGTGTTACCAAAATACTGTGATGATGAAATTGCTTTCGCGTTCGAAAATTTCTTCCTTGCTTCATCAGTTTC
CTCTATCTGAGTCTTTGAGGCAGCTGTGCTTGTTTTCCTTTGGAAGCCATTATCCATTCCATACTCATGAAAGAAGTCTGAGGTTTTTGGTGCTGCTACA
TGGCCAGTCTTGTTGCCTCCTCCAGTTTTTGATTCTGTTGATGGCTCATTTTCCATGTATTGAAAACGTGAATGTGAGGATGGGCCACTTTTTGCAGCTG
AAGTAGTAGTCGTCATTGTTGGTAAAGCAGGTTTTGGCTCTTCAGGTTTCTGATCATACAGGCTTTCATTTGACTTTGTAGTGAGCTTTTTTACAC
page-top