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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_KMP_all.Contig2721
Contig Information
Length 1062 bp
Tissue Shoot grown under continuous light
Clones 36 Clones [Download: CSV  ,  FASTA ]
whkp10c20    whkp11c17    whkp11p19    whkp11p20    whkp12e17    whkp2c23    whkp2k07    whkp3j02    whkp3m15    whkp5p07    whkp7j10    whkp7j22    whkp7n07    whkp7o10    whkp14p08    whkp15g20    whkp15j02    whkp17e22    whkp19n23    rwhkp10c20    rwhkp11c17    rwhkp11p19    rwhkp11p20    rwhkp12e17    rwhkp2c23    rwhkp2k07    rwhkp3j02    rwhkp3m15    rwhkp7j10    rwhkp7j22    rwhkp7n07    rwhkp14p08    rwhkp15g20    rwhkp15j02    rwhkp17e22    rwhkp19n23   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os03g0592500 [Oryza sativa (japonica cultivar-group)] >gi|122246902|sp|Q10HD0|CB23_ORYSJ RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor >gi|152013384|sp|A2XJ35|CB23_ORYSI RecName: Full=Chlorophyll a-b binding protein, chloroplastic; AltName: Full=LHCII type I CAB; Short=LHCP; Flags: Precursor >gi|50839002|gb|AAT81763.1| chlorophyll a/b binding protein [Oryza sativa (japonica cultivar-group)] >gi|108709618|gb|ABF97413.1| Chlorophyll a-b binding protein, chloroplast precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi|113549057|dbj|BAF12500.1| Os03g0592500 [Oryza sativa (japonica cultivar-group)] >gi|125544706|gb|EAY90845.1| hypothetical protein OsI_12453 [Oryza sativa Indica Group] >gi|125586998|gb|EAZ27662.1| hypothetical protein OsJ_011145 [Oryza sativa (japonica cultivar-group)]
Score 1256
Evalue 3.61795e-136
Total Hit Count 500
Registered year 2003
Contig Sequence     [ Download ]
>Wh_KMP_all.Contig2721 
GTTCATCTCACTGAGCTCGCAGGCAGCCCCAGCCACCAGCGAAATGGCCGCGTCGGCGCTGCACCAGACGACCAGCTTCCTCGGCACCGCACCGCGGCGC
GATGACCTCGTCCGCAGCGTCGGCGACTTCGGCGGCCGCATCACCATGCGCCGGACCGTCAAGAGTGCGCCCCAGAGCATCTGGTACGGCCCTGACCGTC
CCAAGTACCTGGGCCCGTTCTCCGAGCAGACTCCATCGTACCTGACCGGCGAGTTCCCCGGCGACTACGGGTGGGACACCGCGGGGCTGTCGGCTGACCC
AGAGACCTTCGCCAAGAACCGGGAGCTGGAGGTGATCCACTCACGGTGGGCGATGCTCGGCGCCCTGGGGTGCGTGTTCCCGGAGATCCTGTCCAAGAAC
GGCATCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCCGGCGCCCAGATCTTCTCCGAGGGCGGCCTCGACTACCTGGGCAACCCCAACCTGGTGCACGCGC
AGAGCATCCTGGCCATCTGGGCGGTTCAGGTGGTGCTCATGGGCTTCATCGAGGGCTACCGCGTTGGTGGCGGCCCCCTCGGCGAGGGCCTCGACATCAT
CTACCCCGGCGGCGCCTTCGACCCACTTGGCCTCGCCGACGACCCCGACACCGCCGCCGAGCTCAAGGTGAAGGAGCTCAAGAACGGCCGCCTCGCCATG
TTCTCCATGTTCGGCTTCTTCGTGCAGGCCATCGTCACCGGAAAGGGACCCGTTGAGAACCTCTTCGACCACGTCGCCGACCCAGTCAACAACAACGCGT
GGGCCTTCGCCACCAACTTCGCCCCCGGAAGCTAAATGTGTTTAGCCATCCGTCCGTCCGTCCGTCCATCGGACGAGATATGCATGTGTACTTGTACGTT
GTGGATCAACGTGTAGCTGCACGTACTTTGTGTGTTTATTTGTACCATGATCGAGCGAGCGAGAGGTCCTCTCGCTAGCTGTGCGCAATGTAAATTAATT
AAGCACAAGGTGTGCACGAGGGAATGGACGGAAGAATCGTGTGTCATCACTCAAAAAAAAAA
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