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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25399  (registered. 2007)
Contig Information
Length 1981 bp
Clones 277 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 32
Wh_DPA20 Seed DPA20 10
Wh_EM Dormant seed with water absorption 6
Wh_EMC Dormant seed with cold treatment after water absorption 6
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 8
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 5
Wh_KMP Shoot grown under continuous light 40
Wh_KMV Shoot grown with continuous light after cold treatment 17
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 17
Wh_PCDAM Anther at meiosis 6
Wh_RDr Root of dessiccated seed 23
Wh_SHC Shoot grown with cold treatment 2
Wh_SHDr Shoot grown with dessication 11
Wh_V4816 Shoot grown under cold condition for 16days 4
Wh_V483 Shoot grown under cold condition for 3days 12
Wh_VABA Shoot with ABA treatment 8
Wh_VHS Shoot with heat shock treatment 10
Wh_VSCB Liquid cultured tissue 45
Wh_VWD Shoot grown with dessication 4
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Glyceraldehyde-3-phosphate dehydrogenase, cytosolic >gi|18978|emb|CAA42901.1| glyceraldehyde 3-phosphate dehydrogenase [Hordeum vulgare]
Score 585
Evalue 5.05375e-112
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25399 
TTTTTTTTTTAGAGAGTTAATAGAGTTATCTCTCTATTAAGGCAAACACAAGTACTGGACTGAACGATTTATATATTCTTCACAAACCACAACCAAAAAA
GAGTACTTGATTAGCAACTCCATTACAGATACTAGTTGATGCGGAAAACAGAAGGTAACTCATGTCCAACTAACATGAACCAGGCGTCGTCTGGCGACGC
CATCCACATTTATTCTTCGCATAGACAAAGCAGGGACACCTCTGACCAGGCGCCACAAAGGAAAGCAGAGCACTCTACTGAGTCTTGGCCATGTGGCGGA
TCAGGTCGACAACGCGGTTGCTGTAACCCCATTCGTTGTCATACCACGAGACAAGCTTGACGAAATGGTCGTTCAGAGCAATTCCAGCCTTGGCATCAAA
GATGCTCGACCTGCTGTCACCAACAAAGTCGGTGGAGACCAAATCCTCCTCAACGTAACCCATGATCCCCTTGAGCTTCCCCTCAGATGCAGCCTTGATA
GCCTTCTTGATGTCATCATATGATGCAGCCTTCTCGGTTCTAACAGTGAGATCAACAACTGACACATCCACAGTGGGAACCCCGGAAAGACATACCGGTA
AGCTTGCCATTCAGCTCAGGAAGAACCTTACCAACAGCCTTAGCAGCACCAGTGCTGCTGGGAATGATGTTAAAGCTTGCGGCCCTGCCACCTCTCCAGT
CCTTGCTCGAGGGACCATCAACGGTCTTCTGTGTGGCAGTGATGGCATGAACAGTGGTCATCAAACCCTCAATAATACCGAAGTTGTCATTAATGATCTT
AGCTAGGGGAGCAAGGCAGTTAGTGGTGCAGCTAGCATTTGAGACAATGTTAACGTCTGAGGTGTACTTGTCCTCGTTGACACCAACCACAAACATAGGG
GGCATCTTTGCTTGGGGGCAGAGATGACCACCTTCTTGGCACCACCCTTCAAGTGAGCAGCGGGCCTTGTCCTTGTCAGTGAAGACACCGGGTGGACTCC
ACAACGTAATCGGCACCAGCCTCACCCCACGGGGATCTCCTCAGGGTTCCTGACGCCGAAGACGGTAACTGGCTTCTCGCCAAAGAGCAGAGTCTTGTCG
TCCTTGAGCTTGATGTCACTGTGCTTCCAGTGGCCGTGAACGGTGTCGTACTTGAACATGTAGGTCATGTACTCGGTGGTGATGAAGGGGTCGTTGACGG
CGACGAGCTCGACATCGTCGCTCTGGAGGGCTACCCTGGCGACGAGCCTCCCGATCCTTCCGAAACCGTTGATTCCGATCTTAATCTTGCCCATGGCGAG
GGAGTGGAACTGCCGCCGCGACGCGAGAACGGAGATGGGAGGTTGGCTGGGGACGGGACGGGACGGGAGAAGTGTCCCTCGTGCCGAATTCGGCACGAGG
CCAAGCCCGGATGAGAAAATGTGGAGGGAACTGCGGTTAGCTCCTCTGTATCGGTTGCATTAGAGATGTCATGGTCTCCAAATATTTTACATTGAGTGGC
AGTGAATGAAGTGAGTAGGAAGTGGCACAGACTGTCTTAGCCACTAGAGATCTGGGCAAGCTTTGGAATGAATCCTTAGAGAATCTGGGCAGGTGTAATT
TGTTGTCAGTCAGACTGTCCTCCAGGAACTTGTTGATTCCTAGCTGTACAAGGTCAGTGTTTTACTTGCGTTCCCAGAGGGAAGTGAGTGTATAGGAAGC
TTTGAATGAAAGGCCTCATGAACCAAAATTCTCTAGAGAAGAGTTCAAGTTGTGGGTAACTGCTTCCCTAGAAAATGCTGCGGTATTGTAGGTAATGGAA
GCCTGACCTGCAGTATGCAAGCAAGTCGGGATGGTTCACGAGTTCCCTGATAATTTCAGTTTCAGTAAACTAGCAGGTATGGTTTGCATGACTGATGCTT
ATACTGCACTTGGATGGCGTGGTAATCATAGCAGTGATTCAGGAGCTGGGGATTTTGACAGTGTAGTGTTAAAAACGTTCT
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