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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig28411  (registered. 2012)
Contig Information
Length 957 bp
Clones alternative view 606 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 36
Wh_dL Crown of seedling 16
Wh_e Seed DPA10 11
Wh_f Spike at flowering date 9
Wh_h Spike at heading date 13
Wh_oh Pistil at heading date 5
Wh_r Root 3
Wh_yd Spikelet at late flowering 21
Wh_SH - 2
Wh_CSEC Callus 48
Wh_DPA20 Seed DPA20 22
Wh_EM Dormant seed with water absorption 10
Wh_EMI Dormant seed with water absorption after breaking 14
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_KMP Shoot grown under continuous light 8
Wh_KMV Shoot grown with continuous light after cold treatment 13
Wh_MS Seed DPA5 of DT3DL CS wheat 14
Wh_OKCS Seed DPA5 10
Wh_PCDAM Anther at meiosis 5
Wh_RDr Root of dessiccated seed 14
Wh_SHC Shoot grown with cold treatment 6
Wh_SHDr Shoot grown with dessication 2
Wh_V483 Shoot grown under cold condition for 3days 3
Wh_VABA Shoot with ABA treatment 3
Wh_VSCB Liquid cultured tissue 22
Wh_VWD Shoot grown with dessication 3
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 6
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 2
WH_XL Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 12
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 5
WH_XN Leaves, plant was grown at constant 23Ž 3
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 13
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 9
WH_XT Roots, 18 day old plants were grown hydroponically 24
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 15
WH_SP 11
WH_XA Root 29
WH_XB Root 24
WH_XC Root, treated at 50 microM Al for 6h 51
WH_XD Root, treated at 50 microM Al for 6h 28
WH_XE Seedling, infected with leaf rust 9
WH_XF Seedling, infected with leaf rust 14
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 26
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|75246527|sp|Q8LRM8.1|TCTP_WHEAT|TCTP_WHEAT RecName: Full=Translationally-controlled tumor protein homolog;
Score 342
Evalue 4.00E-92
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig28411 
TTTTTTTTTTAAAGACTCAAGTTTATCCGATAGAATAACAGGGCAGAATCTCTTGATTCAACCAAAACACAACCACACCAATTTCACGATTACCATTACA
AAGCAAATCCCACAATTATCAGAAAGTTTTCAAGACACTCAACATCTGACAGTTACTGACACCAACATTGGAGAGTCGACTGACAACCATAGATAAGAGC
AAAAATACTGAAGACAGCATAGATTTTAGCATACAGTGCGATTAGCACTTGACCTCTTTCAGCCCATGTGCAAAGTACAGGAAAGTTGGATCAGCAGCTC
CCTCCTTGTAGTAGGCGAACACCACGCCGCCATCATCATGCATGCTCTCGCCAACAAAGAACTGAAGGTCCTTGAGCTTGCTAAGAAGATACTTTGTGGC
GGACTCAACATTCTTCTTGAAAGCATCTAGGTCATCCCCTTCAAGCTTGGCAGAGAGGTTCTTGATGTAGCGCTTCATGTGAGAGATAAACTGCTTCTTG
TCAAAAGCAGGTTGCTCCTGAAGACGGAAGGTGTCAACAATGTCAACCACCTTCACGGCCTGGTCATCAACACCCTCATCATCACCACCACCCTCAGCAG
AGGGATTGGCTCCAATGTCCACATCAACTGCTCCTTGAACGACCCAATGGCCATCGACTTCCCAGAGCACGCCGTTCTCCAGCTCCCTGTAAGGGAACGA
ATCCGACAGAAGCTCGTCGCCGGAAAGCTTGTCCTGGTACACGAGCATGGTGCCGCCTCTTGAGATTTCTCCCCCGAAAAAAGAGAAAACCCTAACGAGC
TCTGGGGGAGGCAGGGGAGTAGCCCGATTTCCCGCTTCCATTCGAACCGACAAACGCCCAACTATCACCCGCGTTTAACGTTAGCTGAGGCAATTGCAGC
GTTTTTGTGTCGCTAAGACGAAACGTGCCTTGCAAAATTTGCAACGATGACATTTTA
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