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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig5814  (registered. 2012)
Contig Information
Length 596 bp
Clones alternative view 108 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 3
Wh_dL Crown of seedling 5
Wh_e Seed DPA10 3
Wh_h Spike at heading date 1
Wh_r Root 2
Wh_yd Spikelet at late flowering 2
Wh_SH - 1
Wh_CSEC Callus 3
Wh_EM Dormant seed with water absorption 4
Wh_EMI Dormant seed with water absorption after breaking 4
Wh_KMV Shoot grown with continuous light after cold treatment 2
Wh_MS Seed DPA5 of DT3DL CS wheat 5
Wh_OKCS Seed DPA5 4
Wh_PCDAM Anther at meiosis 3
Wh_SHC Shoot grown with cold treatment 3
Wh_SHDr Shoot grown with dessication 1
Wh_VHS Shoot with heat shock treatment 1
Wh_VSCB Liquid cultured tissue 1
Wh_VWD Shoot grown with dessication 1
WH_XJ Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 2
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
WH_XR Roots, 18 day old plants were grown hydroponically 5
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 1
WH_SP 7
WH_XA Root 16
WH_XB Root 4
WH_XC Root, treated at 50 microM Al for 6h 6
WH_XD Root, treated at 50 microM Al for 6h 6
WH_XF Seedling, infected with leaf rust 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 1
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|57471718|gb|AAW50990.1|| ribosomal protein P1 [Triticum aestivum]
Score 213
Evalue 1.00E-53
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig5814 
TTCTAAAAAGACCATCCCAAGGTGGTTTGCAGTACTCATTGCACAGATACTTAGGTCTCAAACATATTAAATCCGCAAAATTCGACCTAAAAGCACATAA
GATAAGTAATCCTTAGCATAAAAGATTCCACAGGAGAACTGGAATTGAACTGCTTAGTCGAACAAGCTGAAGCCCATGTCATCATCGCTCTCTTCCTTAG
CCTCCTCCTTTTTCTCTTCTTTCTTCTCTTCAGCGGCAGCAGCACCACCAGCAGCCGGGGCAGCAGCAGCAGCAGCTGGAGCACCACCTCCACCAGATCC
GACGGAAAGGATGAGGTCATCGACGCTCCTCTTCTCCAGGAGCTTGGCGAAGAGCGCGGGCCAGTAGGCCTCAACCTTGATTCCGGCAGCCTTCACCACC
GTCGCGATCTTCTCAGAAGTGATGGGGATCCCGTCATCGTGGAGGATGAGGGCGGCAAGGGTGCAGGCGACCTCGCTGGAAGACATGGCGACGGATTCTC
ACCGGAGCAGATCTGCGATCTTGGGAGGCGATGGAAGTGGAGGCGCAGGAGGCCCTCGTGCCGAATTCGGCACGAGGCGCGCCTGCTGCCTTCCTT
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