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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig15467  (registered. 2007)
Contig Information
Length 1508 bp
Clones 22 Clones [Download: TSV  ,  FASTA ]
Wh Spike at meiosis 5
Wh_SL Seed DPA30 2
Wh_dL Crown of seedling 4
Wh_e Seed DPA10 5
Wh_f Spike at flowering date 2
Wh_h Spike at heading date 2
Wh_r Root 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Os02g0600100 [Oryza sativa (japonica cultivar-group)] >gi|47848282|dbj|BAD22146.1| putative 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) [Oryza sativa Japonica Group] >gi|113536874|dbj|BAF09257.1| Os02g0600100 [Oryza sativa (japonica cultivar-group)]
Score 1799
Evalue 0
Total Hit Count 432
Registered year 2007
Contig Sequence     [ Download ]
>Contig15467 
gccgacgccgtgcgatccaagncgAACCAACcggnacGGAAGTGCCCCCAACCCAAACGAG*CGGCGACGAG*ATGGACGGCGGCGGTGGCGGCGGAAGC
ACAAGCGGCGACGACGGGAAGCAGGAGAAGCACCTGGTGCTTGCCCACAAGCTCTTCCTGCTCTCCCACCCCGATGTTGACGACCTCTCGAAGGTCGACC
TCCGCTCCGACGTCCTCTCCGCCGTAAAATCCGATGACATGGCGCCGCTGTTCGAGTCGCTGGCCGCCGCGGGCGTGCTGGAGCCGG*ATGCCGTGCTGC
TCTCCGAGATGCGCGCCCGGATCGACGAGGAGATCCGCAAACTCGATGAGAAAATTGCCGATGCTGAAGAGAATTTGGGCGAGAGTGAAGTGCGTGAAGC
CCATCTTGCTAAGTCCTTGTACTTTGTAAAGGTTGGCGAGAAGGAAAAAGCACTGGAACAACTTAAAGTTACTGAAGGAAAAACTGTAGCCATTGGCCAG
AAGATGGATCTTGTGTTCTACACTTTGCAAATTGGCCTTTTCTACATGGACTTTGATCTCATCTCAAAATCCGTTGATAAGGCAAAGAAGTTGTTTGAGG
AGGGAGGTGACTGGGAGAGAAAGAACAGATTGAAAGTGTACGAAGGCTTATACTGCATGGCAACCAGAAACTTCAAGAAAGCTACCAGCCTGTTTTTGGA
CTCCATCTCAACTTTCACAACCTACGAGTTGTTTCCATATGACACTTTCATCTTCTATACAGTCCTCACAAGTATCATCTCATTGGATCGTGTATCTCTA
AAACAAAAGGTGGTGGATGCACCAGAAATCCTTGCAGTGATTAGCAAAGTACCACACCTCTCAGAGTTTCTCAACTCTCTGTACAATTGCCAGTACAAGT
CATTTTTTGTTGCATTCTCTGGCTTGACGGAACAGATCAAGTTAGACCGTTATCTTCAACCTCATTTCC*GCTACTACATGAGGGAAGTGCGCACTGTTG
TCTACTCACAGTTTTTGGAGTCATACAAGAGTGTGACGATGGAAGCTATGGCTTCTGCATTTGGTGTGACTGTTGATTTCATAGACCAGGAACTTTCTCG
CTTTATTGCAGCTGGGAAGCTTCACTGCAAGATTGACAAGGTCGCTGGTGTTCTGGAGACAAACCGGCCTGATGAGAGGAATGCTTTCTACCAGTCGACC
ATCAAGCAAGGGGACTTCTTGCTAAACCGCATCCAGAAGCTATCCCGAGTCATTGATCTGTAAAAGTTGCTGTTCTTGTTGGGGAGCTCTGGCCCAGCAA
AGGTTGTGCCCGGTTGTTGGACCTATTCCAGCTAGCCTCCTAGAGTATATGACCAGTGCCTGGCTTTGTTGAGCGTGCGGAGGAGGAAGT*CTTGTATGA
ATTACTATGAACTCATATCCCAGAAGATCAGGCTGAAGGAT*CTTT*CTT*CTGTGATGAACCTGTTTATTCATTCCAAGCcttatcatctggcttagtt
gnaattat
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