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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Wh_V483_all.Contig1620
Contig Information
Length 526 bp
Tissue Shoot grown under cold condition for 3days
Clones 13 Clones [Download: CSV  ,  FASTA ]
whv3n1a06    whv3n8n12    whv3n8o07    whv3n15h10    whv3n18k03    whv3n19j24    rwhv3n1a06    rwhv3n1f02    rwhv3n8n12    rwhv3n8o07    rwhv3n15h10    rwhv3n17k03    rwhv3n19j24   
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit RecName: Full=Salt stress-induced hydrophobic peptide ESI3 >gi|76363599|sp|P68179|LT01_HORVU RecName: Full=Low temperature-induced protein lt101.1; AltName: Full=Blt101.1; Short=Blt101 >gi|439273|emb|CAA80984.1| 54 amino acids [Hordeum vulgare subsp. vulgare] >gi|551068|gb|AAA21847.1| salt-stress induced hydrophobic peptide [Lophopyrum elongatum] >gi|9453848|dbj|BAB03288.1| hydrophobic polypeptide [Triticum aestivum] >gi|13751167|emb|CAC37081.1| putative membrane protein [Hordeum vulgare subsp. vulgare] >gi|71006810|dbj|BAE07207.1| plasma membrane protein [Triticum aestivum]
Score 224
Evalue 3.97931e-17
Total Hit Count 345
Registered year 2003
Contig Sequence     [ Download ]
>Wh_V483_all.Contig1620 
TTTTTTTTTTACAGTACTGACCTCCCACTTCGATTGCTTCCGAAGTAGAGTACTTTAAATTTAAGATCACAAACACTGGAGCCGACGAATGCCCTAAAGC
CCTCGAGCTACGTACACTCGTGACATCACAGGATCAACAATACCAAGTTCCAAAAAAAAATGAAATCCACAATATTCAATACATACAAGCTTACACAAAG
ACATGCTATCTTAACACAGACAGCATCAGTTGCTCGTGCACAGCGACTCGCTCGTCCAAGCCTGGATCCTGCAGCAGAGGCTGTTTGCTTAAACTACCAG
CACGTACACCGCGTAGATGATCCCCGGTATGTACCCCAGTATGGTCAGCAAGAGACAGATCCAGAACTCCACGCCGAGTTTGTAGCGCAGGAAGACGCCG
ACGGGAGGCAGGATGATGGCGAGGATCACCTCCAGGACTGTTGCCGAGCCCATGGCTTGCTCACTTCACTCGAGGCCCTCTCCTTTCTTTCTCTCTGCTT
TCCCTTCTGAAAGAGGCGACTGGATT
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