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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig34265  (registered. 2012)
Contig Information
Length 1598 bp
Clones alternative view 415 Clones [Download: TSV  ,  FASTA ]
WH_XI Two-week old seedlingsi22Ž 16L-8Dj 3
WH_XM Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 1
WH_XN Leaves, plant was grown at constant 23Ž 176
WH_XO Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 30
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 74
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 27
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 47
WH_XV Leaves, plant was grown at constant 23Ž 26
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 11
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 15
WH_XY Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|3914470|sp|Q40070.1|PSBR_HORVU|PSBR_HORVU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;"
Score 252
Evalue 1.00E-64
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig34265 
TTTTTTTTTTTTAGTAATTAATTATCGGTATTATTGACTGCGGGTACTGATATTTACATCCAGTTACATATGTCGTTACTTTTGTAACCCGTACAATACA
CATCGTTTGGTGCATATTTTGGTTTGCCGCACAGGCTTCAAGAAGCCAATGCACTAGTATTGTAGACAAGAAGAGCACCGCCCAGCAGAATTCCAGCAAG
AGTCACTGCCCAGAGAAACAGCCCTGTCTTTCCTCCAACATAAACGTCACCACTTGGAGACCATTCTTCTGGTGTATATATCGGGCTGTACCCATCAACG
TTTGCTCCATACTTGTCGGCAAACTGGTAAACACCCTTCCCCTTGGCTACCCTTCCGGACGCATCAACGCCTTCCTTGAACACCACTCCACCACCAGGCC
CATAGGGCTGGGCAGTCTGGACCTTTTTCGCCTTCTTGCTGGCTACTATGAGCAGCGATGGCCTCGCCGATGGTCGCGCGCCTCGAAGCTTCGCTCGTTC
TAACAGTGGAGAGGGAGATGGTTTCAGAACCAAAGACGCCATGACAGAGGCAGACATGTTAAACGCTTGCTCACTGGCTCACTCTCTCTCTCTCTCCCCG
GACCATCACCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAA
TGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCC
CGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAA
CGATGCCGGAAACACGACCCGGCCAATTAAGGCTAGGAGCGCGATGCCGGCCGAAGGGTCGAGTAGGTCGGTGCTCGCCGTGAGGCGGACCGGCCGACCC
GGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA
TGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGAT
TGGGTAATTTGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCAT
GGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCA
TCGGATCAGCGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACG
GTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCAAATTGGTTCATACTTGCACATGCATG
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