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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig26393  (registered. 2012)
Contig Information
Length 882 bp
Clones alternative view 14 Clones [Download: TSV  ,  FASTA ]
Wh_KMP Shoot grown under continuous light 2
Wh_SHC Shoot grown with cold treatment 2
WH_XI Two-week old seedlings（22℃ 16L-8D） 1
WH_XQ Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ ) 2
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XD Root, treated at 50 microM Al for 6h 2
WH_XF Seedling, infected with leaf rust 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115489302|ref|NP_001067138.1|| Os12g0581900 [Oryza sativa (japonica cultivar-group)]
Score 266
Evalue 2.00E-69
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig26393 
TGGAGGGAGAAGCAGGAGACAGTTTCATGATAGGATATGGAGCAAGCAGACGAAGCATCGTCGGTGAACAAGGGGAGCCCAGAGCGGCTTACCATCGACC
AGGACGACGGCGCGTCGTGGCTGAGCCTCACGGTCGGCGCAAACGAGTCGCTGGAGACGGTGGCAAACTGCTCCGAGCCTGAGCCTGATCCTGAGCCCAA
GCCTTCTGCTGCCCCACACAAGGTTTTCTCATGCAACTTCTGCATGAGGAAATTCTTCAGCTCACAGGCGCTGGGCGGCCACCAGAACGCCCACAAGAGG
GAGCGCAGCGCCGCCAAGCGCTCCTACCATGCACAGAGGATGGTGATGGGGCTGCCTCTCGAGGCGCACGCCGCCTTTGTGCAGTCCCTGAGAGTTAGCC
AGAGCTCGGTGATTCAGAAGTCGAGCCAGCCAACACAAATCAGGACAGCACCAAGGTTTCATGAAGATGGGATGACCTGGGCAACAATTCCCTGCGAGGA
GGTGCTCAACTCAACATGGCCAGGAAGCTTCAGAGCGAGGACCCAACCTTCAGAGCAACAACCATCAGAACAAAGTAAGATAGACTTGAATCTCAGGCTT
TGATAGGTTGATGTATCAACTTTGAACAGTACAAAAGTCCTCATCAAGTTTGTCCTTCTGAATAAATTGGCATGAAGTGATCAGTTAAGCTCAGCTCACC
ATCAGAATCAAAGATGGTACTGAACTATGAAGATGATGTTGTTCCTTTTGAATTCGTGGCGACGCTGCTGCAATATTTATGTAGCCAGATAGTTATTAAT
ATGATCATATGTAGTCTAGTTGACATCGGTGTGAAGGAACCCAGGGATTTTTTGTACTTACTAGAAGCAGCATATATAATGT
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