Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig21398  (registered. 2007)
Contig Information
Length 1805 bp
Clones 10 Clones [Download: TSV  ,  FASTA ]
Wh_EMC Dormant seed with cold treatment after water absorption 2
Wh_EMI Dormant seed with water absorption after breaking 2
Wh_OKCS Seed DPA5 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit hypothetical protein OsI_01113 [Oryza sativa Indica Group]
Score 1646
Evalue 0
Total Hit Count 23
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig21398
GGTTTGGGAGGGCGGCAACGCAGACCCATCTCCCCCAAATCCATCCCGCGGGAGACACGAGCGTGCGAGGGAGAGAGGCCGCTGCTCGCCCTGGTCCCGG
TGGGATGAAGATTGACGATCCCCTCGACTTCGAGGGGGATAACGACCCCCTCCTCACCGTCCGCCGCCCCGCCAAGAGGAAGAAGGTTATTGAGCTGGAT
GATCTCGTAGAAGATTACTTTAATTCCGGTAAGGATGAGCTCAAAGCTTCTGCTGCTAAGTCTAAGGGTCGCCCCAAAGGAGACAATTCAGATGATGAAG
ATAGGCAGGTCAGGAAGAAGGAGATTGACTTCTGCAAATTTGTGGAGGAGTGTGAGGAAAAGGCGAAAGCGATGGATCCTGGAGAGGATGTACCCCAATG
GGGCCAGCAAGTTTTCGGCTGTCAGAAATCACCCTCGGTTCTTAATAGCACGGGAGTTGAAAATTGCCAACTTTTGCAATCATTCTGTGGGGATGAGCAG
TTAGGTTTTGATCTAGAGATTGAACGAGGAGAGGGCTTTTTCGAAGGCATGCTGATCAATGGATGGCTTTTGAAGTTGGTACTCCTATATGGTTCTGTTG
AAGACTCTATAGCATCATGGGTGCTGACCAAGTTACTGTACTCATCCAATAAGAAGTTGCAAGATTCTGCATCTGAATTTTGGGGTAGTCTCCTTTCCCT
AAATGAGGATGATAAACCATTGGTAAACTTTGGATACTTTCCAAGCTACTCTATTCTTATGGGTGCTATACTCAACTATGGATACCTACATGATGCTCCT
TGCACTAAAACTTGCACCTCTGAAATTGCGGTTGCAGACACTTCAGATGGTGGTCCACCTCAAAACATCACTGCATGGTTAAGAGTTGTATCTGCTTGCT
GCAAAATTAGAAAAATGCATGCCGTCTTCTCACCTTCGGAAGCGGAAGATGTCCTTGTTATTGTTATTTCACTCTTTTTGGACCGTCGACTTGAAGGGCT
GCTGCTTATTTTGGGAGATTGCCTAAATTCACTCATCTCATACTTCAATACGAGTGAATGGGAAAGTAGCTGTCTGATTGTTGCTGAGTCAATTTCTAAG
AGGGTCAAGATGGATCTTAATTGTTTAAGGCTTGTTGACTGCATTACCGGAACCAACGACCGTAGCAAATTCCTAAGGAGCCAGCTGGCCCTTCAGTTGC
TCAAAAATAGCTTCGGCCTTAAAGTAAGCATGGTGGCGAATGTTGAAAGGATCCTGAAGTCGGTCACATCGATAAATGTGAAGGAGAAAGAATGCAATTT
CTTTGTGCTGTACGTGCACATAGTTTTGATGGACAACCTGCTCTTCTCTAGCGACGCGTTCAGAAACAAGACAGCGATAATCGACGCTTGGCGCATTTTT
TTACGGAACTGCTCGACCCATATAGGATGCACGGACTGGAGGTTCTACGCTTCGAAGGTCCGAAACAAGGCGTCGTATCTCCTGCAAGGTGCAATGCTGA
AAAGGCCTGCTGGCAGTGGTAACATTCCTGCCAAGTGATTTGAACCAACCTACTGAAATGCCTGCTGCTGGAGAGCACGGAACCTACGCCCTGATTTACT
AGCACAAGTAGTATGTTTAGGGTGAATTTTAGGCTCATTTTTGGGTACCTGATGGTGGCTGACAGTAGTATTCTCAGCCCATGTATAGCGTAGTCCCCAG
CACTCTCAAGTCTCAACGCCGAGAATGCCATTTGATGAACTTTTGGAGCATGGACTTCTCTTAAATATATTTGCTAGTCATATTTGTACCTTCTAAAAAA
AAAAA
page-top