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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

MUGEST2003_all.Contig25415  (registered. 2007)
Contig Information
Length 1840 bp
Clones 406 Clones [Download: TSV  ,  FASTA ]
Wh_CSEC Callus 16
Wh_DPA20 Seed DPA20 9
Wh_EM Dormant seed with water absorption 12
Wh_EMC Dormant seed with cold treatment after water absorption 16
Wh_EMI Dormant seed with water absorption after breaking 6
Wh_GCPCDAM Anther at meiosis of DT4B CS wheat 2
Wh_HGCPCDAM Anther at meiosis of MT4B CS wheat 6
Wh_KMP Shoot grown under continuous light 39
Wh_KMV Shoot grown with continuous light after cold treatment 22
Wh_MS Seed DPA5 of DT3DL CS wheat 15
Wh_OKCS Seed DPA5 18
Wh_PCDAM Anther at meiosis 7
Wh_RDr Root of dessiccated seed 6
Wh_SHC Shoot grown with cold treatment 4
Wh_SHDr Shoot grown with dessication 2
Wh_V4816 Shoot grown under cold condition for 16days 76
Wh_V483 Shoot grown under cold condition for 3days 19
Wh_VABA Shoot with ABA treatment 1
Wh_VHS Shoot with heat shock treatment 78
Wh_VSCB Liquid cultured tissue 6
Wh_VWD Shoot grown with dessication 46
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit Unknown (protein for IMAGE:5194336) [Homo sapiens] >gi|111494016|gb|AAI11385.1| Unknown (protein for IMAGE:5198300) [Homo sapiens]
Score 1154
Evalue 1.17357e-124
Total Hit Count 500
Registered year 2007
Contig Sequence     [ Download ]
>MUGEST2003_all.Contig25415 
TTTTTTTTTTCGAACCACAAATAACCCAAACCAATTCATTCATAGAGATAGGGCGGATGAGCAAACCGGAATCTAAGTTCCAGCCACCACTCAGTTCCAA
TTCCAAAGGGTATTATAATAGAGATAGATAGATAGATAACAAAGTACTAGCAGCACCTCGAGCATTCGGTGTAAAAAACACACAAATCTGGATCAAACTT
GTTTCACCCAACAGATATCTTGATGCCTATGTATGTGTATCTCAAACACCCAGAAGCACTAGATACCAAGTATCGCAGGTAGGCAACCACGCACAGCTGC
TTACTTGCCACCACCGATTTCCTTCACAGCGCAGATCTGTTCTTCACCCATGGCGGACATCACAGACAGGATCAGGTCCTTGCCATCAGCAAATCCAGTC
TTGATCTGGCCAAGCAGAACATCATCAGTGGGAAGCTTCAGGTCATCCTTAGTGTTACCACTCTCAGTGAGAAGGCTGACATATCCATCATCAGTTATGT
CAATCAGCTGATAATCTTGGCGGTCAACATGGGGGACGTCACAGTTGTGGGATGAAGGAACGATATCCTCAAGCTTCTTTCCATTAAAGATGTCGCCAAG
CCGGTTTCATCAGGCAGCCCATGGTACGGTGCCGACCGTGTGCTCTACCTCGGCCCGCTTTCCGGAGAGCCCCCGAGCTACTTGACCGGCGAGTTCCCCG
GCGACTACGGATGGGACACCGCCGGGCTCTCGGCCGACCCCGAGACCTTTGCCAAGAACCGGGAGCTCGAGGTGATCCACTGCCGGTGGGCCATGCTCGG
TGCGCTTGGATGCGTCTTCCCCGAGCTTCTTGCACGCAACGGCGTCAAGTTCGGCGAGGCGGTATGGTTCAAGGCCGGTTCCCAGATCTTCAGCGAGGGT
GGCCTCGACTACCTGGGCAACCCCAGCCTCGTGCACGCACAAAGCATCCTTGCTATCTGGGCATGCCAAGTCGTGCTCATGGGCGCTGTTGAGGGGTACC
GCATTGCTGGCGGCCCACTCGGTGAGGTAGTCGACCCACTCTACCCCGGGGGCAGCTTCGACCCACTGGGCTTGGCTGACGATCCAGAGGCATTCGCGGA
GCTCAAGGTGAAGGAAGTCAAGAACGGTCGCCTCGCCATGTTCTCTATGTTTGGCTTCTTCGTGCAGGCCATCGTCACCGGCAAGGGCCCACTCGAGAAC
CTCGCTGACCACCTCTCCGACCCTGTCAACAACAACGCATGGGGCGTTTGCCACAAACTTTGTCCCCGGCAAGTGAGGCGTTGGCGCTCGCTAGCTGCGA
GTTGTAGCCATATATAAAGGCAACCTGCGGTGAACTGCACACATAATGGGTGGTTCAAATTGTAACATCATGGTGTAAATTACAAGGATCTTTGGGGAAA
TGGTTTGATCTGCCCGCTTGCTTCATGTCCTGGATGTAGCCTGTGTGTTGCTCCATGAGAAATGAGAACGATGAATACTTGGGCGTTACTTAGTCAGAGG
TCGCTCTTCGTGATGGCAACTTATGCTCTCATTTTCTTATGGTCCATCGACCATCGTGATCATGCTGTCTGTTCGGAGAGCCCGTTTGCTTGTATGGTTG
AACGCCGGCCAGCCCCAAAGTTGTACAAAGAGTCATTTTCGTTCAGTTTTACTAATGCATTGGCATGCAATGTTTCCGAAAGTTCGNGAAANAACTGAGC
ACCCCTGAACCTAGGCTCGAAGTGTACTAGGGCANAGGAANTCTGAAAGCATAGTGACATGCGTTCACTCTAGTGTTGTGAATGGCTCGGCAGATATNGC
AGNNTATTTCTCCATGAAGTATGNGGATGGACGCATAGAC
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