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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig11117  (registered. 2012)
Contig Information
Length 1670 bp
Clones alternative view 16 Clones [Download: TSV  ,  FASTA ]
Wh_SL Seed DPA30 1
Wh_VWD Shoot grown with dessication 2
WH_XR Roots, 18 day old plants were grown hydroponically 2
WH_XE Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 3
WH_XW Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 3
WH_XX Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 3
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115456932|ref|NP_001052066.1|| Os04g0119500 [Oryza sativa (japonica cultivar-group)]
Score 652
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig11117 
TTTTTTTTTTAACAAAAAGCACTATATTTTTATAGCACCTCCAAAATATGAGCCTTATTCATTGTACTACATCATCATAATGATGATGGCCATGTCTCAG
CATCCAATACAATTCAGTCTCATTATCATCATGGTTCTTCTATATCCTAATCAGCTCTAAGCTTCACAGACTGCAGCTACAGCAGCATGTACACAAGCCT
GCTTACAGATGCTTTCTAGCATGAGCAAACGCCGTCCTCGTCCTCATCTGCAAGCGCGAGCGTCTCAGGACCGAAAACAATTATGCCGGATAGCGTCGCT
CGGTTGTGCATCGGAAGAATGTGCATGGCATCGCGATGATAAGCACTGATGTTTGGTTCCTATCTTCTTCCTGGTCCTGCAAACCTTCTCGCCGTTCCGA
ATACGAGGGCCTTGGTCAGTAGCCCCTTGTCGAAGGTGCAAGCCAGCGCGACCACGCTGCCTATCACGAAGACTTTGGGTAGGTTGCCTGTCCAGTGCTT
CGGCTTCTCGGCTTGGGCGTTGTTGCTGGTCGAACCGGCCTCGGTGTTGTTTTCTGAAGCGGTGAGCTCGTTGGCGACAAACTTTGTGTTGGCGTGTGCC
ATCGCTGCGCATTTCGAGATGGGCTCGCCGGCGGCCCTCGCGGTCTGGTATGCCCGCAGGCCAGGCTCGATCCGTTTGACGCATCCCCACATACCCTGCT
GCACACCCAGCTTCGCGATGCTCCATGGGATACCCATGTCTTCATGATGAAACAGGAGCACCTCACATGCCGTCATTGCACCATCACCGTTTCTTGATTC
AACTGGACGGATGCACCAGCTAGAGTAGTACAGGTCCACACGGCGAGGTTTGCTGCTCCTTGGAACAGAGGGGCGAGGCACGCTCTTGGTAACACAGTAG
TAGGTCTTTCCAGATGCCCATATCCTGCGACCGATAACATACTCCCTGTCGCTGCAGAAGAATGGGAACTTCCTGACCCAGCGAACAACCATCGTTCCGG
TCTTTGTGCACTCCTCCAGCGTCTCGTGCTCAAGAAGCATATCGTCCCAGGTGTTGCTGATCCGGAAGTCATCGTCCCAGAAGAAATCCCTCACGACATC
CGGCGACGCGTCTTCGAAGATGGTGCTACTGCGGTACTGCGGCGGGCCGTTCTGGGGTTCTCTTTTCCAGGCCTGGTATCGGAATGTCGGGAGCGTGCGG
TCCATCATGTGCGTCCAGGCGGGGCCGCCGTCCTTCTCCTCGACGACCCTGCGGAGGTGCATCAGGTCCGGGGTGCTGACCGCCAATTCTTCCTCCACCG
GCGCCATGGAGGCCGCCTTAGCTCTAGGTACGACGGCCAAGTGGTCGGCGGCCGTGGCCTGCGTCAGCGATGGCTGGGCAGGGGCCTGCGCTGCCGCTGC
TGCCGCCAGCACCGGTTGCTGGGGGCCGGCGACGGCGGCTGCCCAGCGCGGGCGCCAGGCCCAGCCGATGAGCAGCCCAACAAGTGCCGCGAGCCAGAGC
GGCGCGGCGAGGGTCGCCAGCTCCCGCGCCACCCCGGCCAGGGTCGGCTCGCGGAAGACCTCCGCCAGCATGTCAGCCAGCACCGACATCTTGTTGTTGT
AGCGCAGAATCCTGGGTGGGCAGGAAGATGATAAATCCGGGCGGGCGCAAGAAGCTCGCTCGCTCGTGGT
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