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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig1965  (registered. 2012)
Contig Information
Length 1103 bp
Clones alternative view 12 Clones [Download: TSV  ,  FASTA ]
Wh_h Spike at heading date 1
Wh_oh Pistil at heading date 2
Wh_V4816 Shoot grown under cold condition for 16days 2
Wh_V483 Shoot grown under cold condition for 3days 2
WH_XI Two-week old seedlings（22℃ 16L-8D） 1
WH_XS Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_XT Roots, 18 day old plants were grown hydroponically 1
WH_XF Seedling, infected with leaf rust 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115461236|ref|NP_001054218.1|| Os04g0671200 [Oryza sativa (japonica cultivar-group)]
Score 477
Evalue 9.00E-133
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig1965 
TGTCTAAAATTTATTGACTGATTGGACATAACAAATTGTTAACGCTATAAATCCAGTGCCCAGAGTGCACAGCAGCACAGGCATCGATCAAATGTTTCTT
GATCCCAAGCATTCCGAGAAAATTAGAAATGTAAAGAAGAAAACTGAATTTCAAATCTTGCGTTCTGCCGACTCGGACTGATCGACTGCACACTGATCGG
CTTCTGTCAATCATCAAATCAATCCGGCATGGCAGAACGCGGCTGTAACGAAGAATCATCGTCATCCCTAGGTGCGGCAAATCTGGAGAGGGGCGACGAC
GTCCGCCATCTCCTCGCACGCCGCGGCGCCGACCTGGATGAGGTCAGGCACGCCCTTGCTCATCAGCAGCCTCCTCCGGCATTCCTCTGCGGCGTCCATG
CCTGACGAGTACGCGCCGTGCACAGCCCCCGAGTGCTCCGCGCTGGCCGCCTCTCCGGCGAAGTACAGCACGCTCTCCACCGGCGCCGAGAACCTCTCGC
ACACGTCCGACGGCTTGCCCACCAGGTCGCACGAGTAGGACCCCAAAGAGTTCGGGTCCGAGCCCCACCGCGACACCAGGTACTGAGTGGGTTCAGTGGC
GTCGGGTATCATCTTCCTCAGGTGACACATGACGAGTTCCACCGCCTCCTTGTCTGAGAGCTTCTCCACATCCTGGGCGAACCGACCGGCGGCCATGAAG
ACCAGCACCGGGTGGCCGGTGGCCTTGTGGAGGTTTAGGAAGTAGCCGCACGTCTTGGGCGTCGGGCCAACCATGCCCAGCACCTGCACATTCGGCCAGA
AGGCCTTGTCGAAGTGCATGGCGACCTTGTTTTCTATGCCGACGCCAAGGTCGGCGATGGCCGAGCTCTTCCAGGATGGCAGCTCTGGCTCGAACTTGAT
TATGTTCGCCTTCAGCACACCGAGCGGCACAGTGATTATGCAGGCGTCGGCCGAGTATTGCGTGCCGTCCTCGATGGTGACCGTCACTCCCTTGTGCTGG
CGTGTAATTTTCTTCACTCTCTGATTCAGACGGATGTCAAGACCTTGAGCGAGAGCCTGAATTACTGGAAAGTATCCATCAACCATCAGGCCATGGCCAC
CAG
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