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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

Contig Detail

Contig7827  (registered. 2012)
Contig Information
Length 1509 bp
Clones alternative view 47 Clones [Download: TSV  ,  FASTA ]
Wh_oh Pistil at heading date 2
Wh_CSEC Callus 1
Wh_KMP Shoot grown under continuous light 2
Wh_MS Seed DPA5 of DT3DL CS wheat 2
Wh_OKCS Seed DPA5 4
Wh_SHC Shoot grown with cold treatment 1
Wh_VSCB Liquid cultured tissue 1
WH_XK Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 2
WH_XN Leaves, plant was grown at constant 23℃ 1
WH_XP Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ ) 2
WH_XU Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 2
WH_SP 3
WH_XA Root 1
WH_XB Root 6
WH_XC Root, treated at 50 microM Al for 6h 5
WH_XD Root, treated at 50 microM Al for 6h 1
WH_XE Seedling, infected with leaf rust 6
WH_XF Seedling, infected with leaf rust 2
WH_XG Seedling, infected with powdery mildew (AvrPm3b) 2
WH_XH Seedling, infected with powdery mildew (AvrPm3b) 1
Assemble Result Assemble Viewer
Homology (BLAST) Top Hit gi|115451853|ref|NP_001049527.1|| Os03g0243300 [Oryza sativa (japonica cultivar-group)]
Score 669
Evalue 0
Total Hit Count 1
Registered year 2012
Contig Sequence     [ Download ]
>Contig7827 
CACCCCTCTCCTCCCCCTGGATCAACTTGTTCCCCAACCCGAACCCAACCCTCGACCGCAGCGACCCACAGCGGCGCAACCATGGTGCTCGAGTCGACGA
TGATCTGCATAGACAACTCGGAGTGGATGCGGAACGGCGACTACTCGCCGTCCCGCTTCCAGGCGCAGGCCGACGCCGTCAACCTCATCTGCGGCGCCAA
GACCCAGTCGAACCCGGAGAATACGGTGGGCGTCATGACGATGGCCGGCAAGGGCGTGCGCGTGCTTGTCACTCCCACCAGCGACCTCGGCAAGATCCTC
GCCTGTATGCACGGGCTGGAAGTTGGAGCTGAAGCAAACTTGGCCGCAGCTATTCAGGTTGCTCAGCTGGCGCTAAAGCATCGCCAGAATAAGAGGCAAC
AGCAGAGAATTATTGTTTTCATTGGAAGCCCTGTGACATACGACAAGAAGGTTTTGGAGACAATAGGGAAGAAGCTGAAGAAGAATAATGTTGCCCTTGA
CGTTGTTGATTTTGGTGAAACTGATGATGAAAAGCCCGAGAAACTGGAAGCGCTGATCGCTGCTGTGAACAGCAGTGATAGCAGCCACATCGTCCATGTC
CCTCCGGGTGATCATGCCCTTTCTGATGTTCTTATAAGCACTCCTATCTTTACTGGTGAAGAAGGTGGAAGTGGCTTTGCTGCTTCTGCAGCAGCTGCTG
CAGCCACCGGAGCTACTGGATATGATTTTGGCGTGGACCCAAATGTGGATCCAGAGTTGGCACTTGCCCTACGGTTGTCTATGGAGGAAGAACGAGCTAG
GCAAGAAGCTATCGCGAAGAAGGCTGCAGAAGACAACAAGGATCAGGCCTCAAGCTCTACTGATGCTATTATGGCTGAAGCAGAACTTACCTTAAATGCT
CCTGCTGATGTTGACGCAGATCTACTGAAGGATGATGATGATGCTCAGCTACTACAGCAAGCACTCGCTATGTCAATGGATGAGGGTGCTTCAGGAGCTG
CAGCCGTGGCTGATGCTGCTATGGCAGAAGCTGCTGCAGATGACCAGGATTTGGCATTGGCTCTTCAAATGTCTGTCCAGGATGCAGAGGCGGCTGGTCA
ATCTGATATGAGCAAAGTGTTTGAAGACAGATCATTTGTGACATCCATCCTTAATTCGCTTCCTGGTGTTGACCCCAATGACCCATCTGTGAAAGATCTA
CTGGCATCTTTGCATGGCCAAGGAGAGCAGGAGGAGAAGAAAGATACGGAGGACAAGCCAGACAAGCCTGAAGATGGGAAGAACTGAAGTCAATGAACTT
CTATTTTCTCAACTTGCAGGCGCATGAAGAAGTGAAGAAGATTGCCTGCATTAGCTGCTTTTACACTCGGGCTATATGAATTTACTTAATCCTCTTGTAA
CTGCGTTGATGATAACTCAAATGCCGAGAGAACTTGTATTATGTCTGCTCTCACGAACGCTCCTCCATGTTTGTCTCAAGGGATTACCTGTTGCAAATTC
ATTTGTACA
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