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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download  -------------------------- How to Order Resources MTA Sample

cDNA

Contig List

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Hit Count : 37138
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Contig Code Registered year Sequence Clone Homology (BLAST - blastx to nr )
Top hit (Definition) Score E-Value
Contig1 Contig1_2012 2012 858 bp 121 Clones gi|1352427|sp|P47815.2|IF1A_WHEAT|IF1A_WHEAT RecName: Full=Eukaryotic translation initiation factor 1A; 298 5.0E-79
Contig2 Contig2_2012 2012 655 bp 10 Clones gi|55977041|sp|P68427.2|H32_PEA|H32_PEA RecName: Full=Histone H3.2 263 8.0E-69
Contig3 Contig3_2012 2012 816 bp 4 Clones gi|115456914|ref|NP_001052057.1|| Os04g0118400 [Oryza sativa (japonica cultivar-group)] 533 1.0E-149
Contig4 Contig4_2012 2012 1389 bp 8 Clones
Contig5 Contig5_2012 2012 896 bp 4 Clones
Contig6 Contig6_2012 2012 1621 bp 37 Clones gi|281494253|gb|ADA71978.1|| UDP-glucosyltransferase [Triticum aestivum] 961 0
Contig7 Contig7_2012 2012 1979 bp 45 Clones gi|259166850|gb|ACV97161.1|| cytosolic glucose 6 phosphate dehydrogenase [Hordeum vulgare subsp. 530 4.0E-148
Contig8 Contig8_2012 2012 706 bp 3 Clones gi|151175361|emb|CAO77317.1|| putative acyl transferase 6 [Triticum aestivum] 305 4.0E-81
Contig9 Contig9_2012 2012 690 bp 2 Clones gi|242064740|ref|XP_002453659.1|| hypothetical protein SORBIDRAFT_04g010020 [Sorghum bicolor] 297 8.0E-79
Contig10 Contig10_2012 2012 648 bp 4 Clones gi|242050990|ref|XP_002463239.1|| hypothetical protein SORBIDRAFT_02g040360 [Sorghum bicolor] 218 5.0E-55
Contig11 Contig11_2012 2012 831 bp 7 Clones gi|115484445|ref|NP_001065884.1|| Os11g0176200 [Oryza sativa (japonica cultivar-group)] 348 3.0E-94
Contig12 Contig12_2012 2012 1182 bp 79 Clones gi|4204859|gb|AAD11549.1|| heat shock protein 80 [Triticum aestivum] 645 0
Contig13 Contig13_2012 2012 1129 bp 29 Clones gi|242033247|ref|XP_002464018.1|| hypothetical protein SORBIDRAFT_01g010630 [Sorghum bicolor] 529 3.0E-148
Contig14 Contig14_2012 2012 769 bp 2 Clones gi|6958202|gb|AAF32491.1|AF091837_1|AF091837_1 DNA-binding protein [Triticum aestivum] 416 2.0E-114
Contig15 Contig15_2012 2012 778 bp 2 Clones
Contig16 Contig16_2012 2012 887 bp 62 Clones gi|242068069|ref|XP_002449311.1|| hypothetical protein SORBIDRAFT_05g007540 [Sorghum bicolor] 353 1.0E-95
Contig17 Contig17_2012 2012 1046 bp 3 Clones gi|115450317|ref|NP_001048759.1|| Os03g0116400 [Oryza sativa (japonica cultivar-group)] 476 2.0E-132
Contig18 Contig18_2012 2012 1201 bp 7 Clones gi|242094684|ref|XP_002437832.1|| hypothetical protein SORBIDRAFT_10g003355 [Sorghum bicolor] 188 1.0E-45
Contig19 Contig19_2012 2012 1097 bp 21 Clones gi|115481766|ref|NP_001064476.1|| Os10g0377400 [Oryza sativa (japonica cultivar-group)] 410 1.0E-112
Contig20 Contig20_2012 2012 737 bp 3 Clones gi|255676368|dbj|BAF17467.2|| Os05g0414700 [Oryza sativa Japonica Group] 339 2.0E-91
Contig21 Contig21_2012 2012 1086 bp 12 Clones gi|166210345|gb|ABY85265.1|| homeobox-like resistance [Triticum aestivum] 490 1.0E-136
Contig22 Contig22_2012 2012 814 bp 12 Clones
Contig23 Contig23_2012 2012 712 bp 66 Clones gi|115445581|ref|NP_001046570.1|| Os02g0284600 [Oryza sativa (japonica cultivar-group)] 254 8.0E-66
Contig24 Contig24_2012 2012 1554 bp 154 Clones gi|125597641|gb|EAZ37421.1|| hypothetical protein OsJ_21756 [Oryza sativa Japonica Group] 731 0
Contig25 Contig25_2012 2012 2626 bp 28 Clones gi|125539159|gb|EAY85554.1|| hypothetical protein OsI_06927 [Oryza sativa Indica Group] 962 0
Contig26 Contig26_2012 2012 825 bp 16 Clones gi|15080682|dbj|BAB62533.1|| peroxisome type ascorbate peroxidase [Hordeum vulgare subsp. 452 2.0E-125
Contig27 Contig27_2012 2012 927 bp 13 Clones gi|84873494|gb|ABC67798.1|| UDP-D-xylose epimerase 2 [Hordeum vulgare] 357 1.0E-96
Contig28 Contig28_2012 2012 1774 bp 21 Clones gi|100620|pir||S24966|S24966 sucrose synthase (EC 2.4.1.13) - barley (fragment) 1155 0
Contig29 Contig29_2012 2012 528 bp 15 Clones gi|32400865|gb|AAP80664.1|AF479045_1|AF479045_1 S28 ribosomal protein [Triticum aestivum] 138 4.0E-32
Contig30 Contig30_2012 2012 737 bp 3 Clones gi|222618059|gb|EEE54191.1|| hypothetical protein OsJ_01023 [Oryza sativa Japonica Group] 238 4.0E-61
Contig31 Contig31_2012 2012 766 bp 4 Clones gi|115456507|ref|NP_001051854.1|| Os03g0841800 [Oryza sativa (japonica cultivar-group)] 397 7.0E-109
Contig32 Contig32_2012 2012 945 bp 2 Clones gi|258644412|dbj|BAI39673.1|| putative cig3 [Oryza sativa Indica Group] 456 2.0E-126
Contig33 Contig33_2012 2012 1105 bp 8 Clones
Contig34 Contig34_2012 2012 794 bp 18 Clones gi|125543902|gb|EAY90041.1|| hypothetical protein OsI_11612 [Oryza sativa Indica Group] 299 3.0E-79
Contig35 Contig35_2012 2012 1846 bp 14 Clones gi|218197711|gb|EEC80138.1|| hypothetical protein OsI_21929 [Oryza sativa Indica Group] 865 0
Contig36 Contig36_2012 2012 519 bp 4 Clones gi|121982|sp|P02277.1|H2A3_WHEAT|H2A3_WHEAT RecName: Full=Histone H2A.2.2 216 6.0E-55
Contig37 Contig37_2012 2012 1432 bp 12 Clones gi|242060116|ref|XP_002451347.1|| hypothetical protein SORBIDRAFT_04g000510 [Sorghum bicolor] 332 7.0E-89
Contig38 Contig38_2012 2012 1194 bp 26 Clones
Contig39 Contig39_2012 2012 737 bp 3 Clones gi|68036606|gb|AAY84877.1|| nuclear transportin [Triticum aestivum] 229 3.0E-58
Contig40 Contig40_2012 2012 844 bp 28 Clones gi|399414|sp|Q03033.1|EF1A_WHEAT|EF1A_WHEAT RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha 533 7.0E-150
Contig41 Contig41_2012 2012 1464 bp 6 Clones gi|242069345|ref|XP_002449949.1|| hypothetical protein SORBIDRAFT_05g026175 [Sorghum bicolor] 298 2.0E-78
Contig42 Contig42_2012 2012 831 bp 3 Clones
Contig43 Contig43_2012 2012 697 bp 4 Clones gi|242072630|ref|XP_002446251.1|| hypothetical protein SORBIDRAFT_06g010096 [Sorghum bicolor] 380 9.0E-104
Contig44 Contig44_2012 2012 1495 bp 8 Clones gi|226494883|ref|NP_001149937.1|| nuclear transcription factor Y subunit A-10 [Zea mays] 384 2.0E-104
Contig45 Contig45_2012 2012 920 bp 11 Clones gi|115451893|ref|NP_001049547.1|| Os03g0247000 [Oryza sativa (japonica cultivar-group)] 360 1.0E-97
Contig46 Contig46_2012 2012 1259 bp 8 Clones gi|115487716|ref|NP_001066345.1|| Os12g0193200 [Oryza sativa (japonica cultivar-group)] 573 2.0E-161
Contig47 Contig47_2012 2012 861 bp 3 Clones
Contig48 Contig48_2012 2012 726 bp 6 Clones
Contig49 Contig49_2012 2012 791 bp 3 Clones gi|125532489|gb|EAY79054.1|| hypothetical protein OsI_34164 [Oryza sativa Indica Group] 281 4.0E-74
Contig50 Contig50_2012 2012 531 bp 3 Clones
Contig51 Contig51_2012 2012 1345 bp 9 Clones gi|62363163|gb|AAX81879.1|| quinone reductase [Triticum monococcum] 612 2.0E-173
Contig52 Contig52_2012 2012 747 bp 2 Clones gi|207174010|gb|ACI23501.1|| putative CENP-E-like kinetochore protein [Triticum monococcum] 362 2.0E-98
Contig53 Contig53_2012 2012 513 bp 4 Clones
Contig54 Contig54_2012 2012 914 bp 2 Clones gi|125545845|gb|EAY91984.1|| hypothetical protein OsI_13674 [Oryza sativa Indica Group] 256 2.0E-66
Contig55 Contig55_2012 2012 839 bp 9 Clones gi|224029787|gb|ACN33969.1|| unknown [Zea mays] 399 2.0E-109
Contig56 Contig56_2012 2012 769 bp 6 Clones gi|218190265|gb|EEC72692.1|| hypothetical protein OsI_06267 [Oryza sativa Indica Group] 449 1.0E-124
Contig57 Contig57_2012 2012 959 bp 5 Clones gi|218186430|gb|EEC68857.1|| hypothetical protein OsI_37454 [Oryza sativa Indica Group] 410 9.0E-113
Contig58 Contig58_2012 2012 1200 bp 10 Clones gi|115462441|ref|NP_001054820.1|| Os05g0182600 [Oryza sativa (japonica cultivar-group)] 410 2.0E-168
Contig59 Contig59_2012 2012 601 bp 23 Clones gi|242082283|ref|XP_002445910.1|| hypothetical protein SORBIDRAFT_07g027890 [Sorghum bicolor] 227 5.0E-58
Contig60 Contig60_2012 2012 768 bp 13 Clones gi|19881735|gb|AAM01136.1|AC108884_18|AC108884_18 Putative Cell elongation protein DIMINUTO (Cell elongation protein 442 2.0E-122
Contig61 Contig61_2012 2012 793 bp 2 Clones gi|14192867|gb|AAK55772.1|AC079038_6|AC079038_6 Unknown protein [Oryza sativa] 367 4.0E-127
Contig62 Contig62_2012 2012 1169 bp 4 Clones gi|242086334|ref|XP_002443592.1|| hypothetical protein SORBIDRAFT_08g022140 [Sorghum bicolor] 356 2.0E-97
Contig63 Contig63_2012 2012 1155 bp 4 Clones gi|242082291|ref|XP_002445914.1|| hypothetical protein SORBIDRAFT_07g027950 [Sorghum bicolor] 371 1.0E-100
Contig64 Contig64_2012 2012 691 bp 2 Clones gi|210077757|gb|ACJ07067.1|| putative BTB/POZ domain containing protein [Triticum urartu] 468 3.0E-130
Contig65 Contig65_2012 2012 1139 bp 3 Clones
Contig66 Contig66_2012 2012 796 bp 3 Clones gi|115439167|ref|NP_001043863.1|| Os01g0679000 [Oryza sativa (japonica cultivar-group)] 354 7.0E-96
Contig67 Contig67_2012 2012 822 bp 5 Clones gi|56202141|dbj|BAD73474.1|| RNA polymerase III subunit-like protein [Oryza sativa Japonica 349 2.0E-94
Contig68 Contig68_2012 2012 766 bp 4 Clones gi|188038088|gb|ACD46678.1|| hypothetical protein [Aegilops tauschii] 335 2.0E-90
Contig69 Contig69_2012 2012 892 bp 2 Clones gi|115434956|ref|NP_001042236.1|| Os01g0184800 [Oryza sativa (japonica cultivar-group)] 402 4.0E-110
Contig70 Contig70_2012 2012 882 bp 33 Clones gi|242050876|ref|XP_002463182.1|| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor] 461 5.0E-128
Contig71 Contig71_2012 2012 1297 bp 79 Clones gi|110270498|gb|ABG57075.1|| heat shock protein 90 [Triticum aestivum] 723 0
Contig72 Contig72_2012 2012 524 bp 5 Clones
Contig73 Contig73_2012 2012 706 bp 2 Clones gi|242095074|ref|XP_002438027.1|| hypothetical protein SORBIDRAFT_10g006840 [Sorghum bicolor] 446 1.0E-123
Contig74 Contig74_2012 2012 868 bp 4 Clones gi|195617882|gb|ACG30771.1|| histone H2A [Zea mays] 166 4.0E-39
Contig75 Contig75_2012 2012 692 bp 4 Clones gi|51535927|dbj|BAD38009.1|| putative protein disulfide-isomerase A6 precursor [Oryza sativa 399 1.0E-109
Contig76 Contig76_2012 2012 1559 bp 8 Clones gi|115464597|ref|NP_001055898.1|| Os05g0490200 [Oryza sativa (japonica cultivar-group)] 726 0
Contig77 Contig77_2012 2012 901 bp 48 Clones
Contig78 Contig78_2012 2012 793 bp 3 Clones gi|242053915|ref|XP_002456103.1|| hypothetical protein SORBIDRAFT_03g030500 [Sorghum bicolor] 384 5.0E-105
Contig79 Contig79_2012 2012 713 bp 2 Clones gi|115446991|ref|NP_001047275.1|| Os02g0588500 [Oryza sativa (japonica cultivar-group)] 290 1.0E-76
Contig80 Contig80_2012 2012 1459 bp 10 Clones gi|218200313|gb|EEC82740.1|| hypothetical protein OsI_27446 [Oryza sativa Indica Group] 420 3.0E-115
Contig81 Contig81_2012 2012 904 bp 5 Clones gi|218202073|gb|EEC84500.1|| hypothetical protein OsI_31190 [Oryza sativa Indica Group] 405 3.0E-111
Contig82 Contig82_2012 2012 584 bp 3 Clones gi|242077278|ref|XP_002448575.1|| hypothetical protein SORBIDRAFT_06g029440 [Sorghum bicolor] 260 5.0E-68
Contig83 Contig83_2012 2012 1498 bp 32 Clones gi|242059703|ref|XP_002458997.1|| hypothetical protein SORBIDRAFT_03g044080 [Sorghum bicolor] 518 6.0E-145
Contig84 Contig84_2012 2012 1481 bp 30 Clones gi|115440075|ref|NP_001044317.1|| Os01g0760600 [Oryza sativa (japonica cultivar-group)] 784 0
Contig85 Contig85_2012 2012 887 bp 7 Clones gi|218188703|gb|EEC71130.1|| hypothetical protein OsI_02943 [Oryza sativa Indica Group] 418 5.0E-115
Contig86 Contig86_2012 2012 1471 bp 81 Clones gi|219362481|ref|NP_001136523.1|| hypothetical protein LOC100216638 [Zea mays] 263 5.0E-68
Contig87 Contig87_2012 2012 1217 bp 9 Clones gi|218195615|gb|EEC78042.1|| hypothetical protein OsI_17477 [Oryza sativa Indica Group] 467 1.0E-129
Contig88 Contig88_2012 2012 696 bp 5 Clones gi|1304266|dbj|BAA10928.1|| HALF-1 [Triticum aestivum] 280 1.0E-73
Contig89 Contig89_2012 2012 784 bp 5 Clones gi|115467130|ref|NP_001057164.1|| Os06g0219700 [Oryza sativa (japonica cultivar-group)] 385 2.0E-105
Contig90 Contig90_2012 2012 808 bp 2 Clones gi|125550314|gb|EAY96136.1|| hypothetical protein OsI_18015 [Oryza sativa Indica Group] 249 2.0E-64
Contig91 Contig91_2012 2012 743 bp 4 Clones gi|219887035|gb|ACL53892.1|| unknown [Zea mays] 357 7.0E-97
Contig92 Contig92_2012 2012 779 bp 15 Clones gi|226506690|ref|NP_001143482.1|| hypothetical protein LOC100276155 [Zea mays] 217 1.0E-54
Contig93 Contig93_2012 2012 1290 bp 15 Clones gi|211906498|gb|ACJ11742.1|| heat shock protein 70 [Gossypium hirsutum] 792 0
Contig94 Contig94_2012 2012 719 bp 2 Clones gi|218193138|gb|EEC75565.1|| hypothetical protein OsI_12238 [Oryza sativa Indica Group] 260 9.0E-68
Contig95 Contig95_2012 2012 892 bp 13 Clones gi|110289207|gb|AAP54159.2|| Chaperonin CPN60-1, mitochondrial precursor, putative, expressed" 387 1.0E-105
Contig96 Contig96_2012 2012 690 bp 19 Clones
Contig97 Contig97_2012 2012 902 bp 5 Clones gi|222618838|gb|EEE54970.1|| hypothetical protein OsJ_02569 [Oryza sativa Japonica Group] 187 1.0E-45
Contig98 Contig98_2012 2012 778 bp 6 Clones gi|242068183|ref|XP_002449368.1|| hypothetical protein SORBIDRAFT_05g008690 [Sorghum bicolor] 284 7.0E-75
Contig99 Contig99_2012 2012 846 bp 9 Clones gi|115483088|ref|NP_001065137.1|| Os10g0530500 [Oryza sativa (japonica cultivar-group)] 243 2.0E-62
Contig100 Contig100_2012 2012 812 bp 5 Clones
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