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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

complex contig list

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Contig name (ex.17539)
Homologous sequence (ex.kinase)
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Hit Count : 37138
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All Data Download ( TSV / FASTA )
Wh (CS)
Wh
Chinese Spring
Spike at meiosis
SL (CS)
Wh_SL
Chinese Spring
Seed DPA30
dL (CS)
Wh_dL
Chinese Spring
Crown of seedling
e (CS)
Wh_e
Chinese Spring
Seed DPA10
f (CS)
Wh_f
Chinese Spring
Spike at flowering date
h (CS)
Wh_h
Chinese Spring
Spike at heading date
oh (CS)
Wh_oh
Chinese Spring
Pistil at heading date
r (CS)
Wh_r
Chinese Spring
Root
yd (CS)
Wh_yd
Chinese Spring
Spikelet at late flowering
yf (CS)
Wh_yf
Chinese Spring
Spikelet at early flowering
FL (CS)
Wh_FL
Chinese Spring
Spikelet (at early flowering) full length cDNA
SH (CS)
Wh_SH
Chinese Spring
-
( ot)

Norin 26
Young spikelets
CSEC (CS)
Wh_CSEC
Chinese Spring
Callus
DPA20 (CS)
Wh_DPA20
Chinese Spring
Seed DPA20
EM (K)
Wh_EM
kitaKEI1354
Dormant seed with water absorption
EMC (K)
Wh_EMC
kitaKEI1354
Dormant seed with cold treatment after water absorption
EMI (K)
Wh_EMI
kitaKEI1354
Dormant seed with water absorption after breaking
GCPCDAM ( ot)
Wh_GCPCDAM
DT4B(CS)
Anther at meiosis of DT4B CS wheat
HGCPCDAM ( ot)
Wh_HGCPCDAM
MT4B(CS)
Anther at meiosis of MT4B CS wheat
KMP ( ot)
Wh_KMP
Kmppd(CS)
Shoot grown under continuous light
KMV (CS)
Wh_KMV
Chinese Spring
Shoot grown with continuous light after cold treatment
MS ( ot)
Wh_MS
DT3DL(CS)
Seed DPA5 of DT3DL CS wheat
OKCS (CS)
Wh_OKCS
Chinese Spring
Seed DPA5
PCDAM (CS)
Wh_PCDAM
Chinese Spring
Anther at meiosis
RDr (K)
Wh_RDr
kitaKEI1354
Root of dessiccated seed
SHC (K)
Wh_SHC
kitaKEI1354
Shoot grown with cold treatment
SHDr (K)
Wh_SHDr
kitaKEI1354
Shoot grown with dessication
V4816 (V)
Wh_V4816
Valuevskaya
Shoot grown under cold condition for 16days
V483 (V)
Wh_V483
Valuevskaya
Shoot grown under cold condition for 3days
VABA (V)
Wh_VABA
Valuevskaya
Shoot with ABA treatment
VHS (V)
Wh_VHS
Valuevskaya
Shoot with heat shock treatment
VSCB (V)
Wh_VSCB
Valuevskaya
Liquid cultured tissue
VWD (V)
Wh_VWD
Valuevskaya
Shoot grown with dessication
ATL (A66)
Wh_ATL
Atlass66
Root
SCT (S66)
Wh_SCT
Scout66
Root
ATLAL (A66)
Wh_ATLAL
Atlass66
Root, treated at 50 microM Al for 6h
SCTAL (S66)
Wh_SCTAL
Scout66
Root, treated at 50 microM Al for 6h
THLS ( ot)*Ru
Wh_THLS
Thatcher Avr Lr10
Seedling, infected with leaf rust
THKLES ( ot)*Ru
Wh_THKLES
Near isogenic line Thatcher Avr Lr10
Seedling, infected with leaf rust
CHAN (Ch)*Pm
Wh_CHAN
Chancellor AvrPm3b
Seedling, infected with powdery mildew (AvrPm3b)
CHUL ( ot)*Pm
Wh_CHUL
Near isogenic line AvrPm3b Chu/*8chan
Seedling, infected with powdery mildew (AvrPm3b)
XI (CS)
WH_XI
Chinese Spring
Two-week old seedlings(22℃ 16L-8D)
XJ (CS)+Na
WH_XJ
Chinese Spring
Roots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D)
XK (CS)+Na
WH_XK
Chinese Spring
Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D)
XL (CS)+Na
WH_XL
Chinese Spring
Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D)
XM (CS)+Na
WH_XM
Chinese Spring
Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D)
XN (N4)
WH_XN
Norin 4
Leaves, plant was grown at constant 23℃
XO (N4)*Bl
WH_XO
Norin 4
Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ )
XP (N4)*Bl
WH_XP
Norin 4
Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ )
XQ (N4)*Bl
WH_XQ
Norin 4
Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ )
XR (H)
WH_XR
Halberd
Roots, 18 day old plants were grown hydroponically
XS (H)+B
WH_XS
Halberd
Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h)
XT (Cr)
WH_XT
Cranbrook
Roots, 18 day old plants were grown hydroponically
XU (Cr)+B
WH_XU
Cranbrook
Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h)
CA (CS)
WH_CA

SP ( ot)
WH_SP

XA (A66)
WH_XA
Atlass66
Root
XB (S66)
WH_XB
Scout66
Root
XC (A66)+Al
WH_XC
Atlass66
Root, treated at 50 microM Al for 6h
XD (S66)+Al
WH_XD
Scout66
Root, treated at 50 microM Al for 6h
XE ( ot)*Ru
WH_XE
Thatcher Avr Lr10
Seedling, infected with leaf rust
XF ( ot)*Ru
WH_XF
Near isogenic line Thatcher Avr Lr10
Seedling, infected with leaf rust
XG (Ch)*Pm
WH_XG
Chancellor AvrPm3b
Seedling, infected with powdery mildew (AvrPm3b)
XH ( ot)*Pm
WH_XH
Near isogenic line AvrPm3b Chu/*8chan
Seedling, infected with powdery mildew (AvrPm3b)
XV (N4)
WH_XV
Norin 4
Leaves, plant was grown at constant 23℃
XW (N4)*Bl
WH_XW
Norin 4
Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ )
XX (N4)*Bl
WH_XX
Norin 4
Leaves, seedling were infercted with blast strain Pr58 for 4 days (23℃ )
XY (N4)*Bl
WH_XY
Norin 4
Leaves, seedling were infercted with blast strain Pr58 for 4 days (27℃ )
R/WH_SD ( ot)
WH_R/WH_SD

F/WH_R ( ot)
WH_F/WH_R

Contig17539 0 0 0 50 42 49 0 0 6 0 0 140 0 0 20 2 0 0 0 2 221 160 6 15 5 0 9 46 139 55 102 28 0 79 0 0 0 0 0 0 0 0 6 0 259 0 9 468 153 344 273 4 2 3 4 0 0 0 0 0 0 554 351 377 295 171 57 70 71 0 0 ribulose-1,5-bisphosphate carboxylase/oxygenas...
Contig11974 0 0 8 6 64 50 1 1 5 0 0 107 0 0 1 0 0 0 0 11 89 85 13 24 25 0 0 54 159 160 113 223 2 108 0 0 0 0 0 0 0 0 58 0 74 0 60 130 42 137 171 2 2 1 2 0 22 0 0 0 0 266 245 305 197 26 19 27 21 0 1 hypothetical protein [Secale cereale]
Contig11259 0 0 4 5 65 42 0 2 2 0 0 71 0 0 0 0 0 0 0 1 97 82 6 6 25 0 4 31 138 162 97 234 0 113 0 0 0 0 0 0 0 0 70 2 53 1 48 72 70 99 138 0 2 1 0 0 17 0 0 0 0 233 207 179 152 20 14 12 24 0 1 hypothetical protein [Secale cereale]
Contig7252 0 0 4 2 37 35 3 2 1 0 0 50 0 1 0 0 0 0 0 6 109 51 8 12 8 0 0 15 89 155 145 126 0 106 0 0 0 0 0 0 0 0 71 2 39 0 21 77 23 93 145 0 0 0 0 0 12 0 0 0 0 209 200 214 115 12 23 23 24 0 2 hypothetical protein [Secale cereale]
Contig6435 0 0 2 10 24 32 0 0 0 0 0 40 0 0 0 0 0 0 0 6 81 52 15 10 23 0 0 44 84 140 84 186 0 103 0 0 0 0 0 0 0 0 78 0 56 0 38 61 24 96 115 0 0 0 0 1 8 0 0 0 0 150 190 189 154 13 4 11 19 0 0 hypothetical protein [Secale cereale]
Contig22498 0 2 0 0 0 0 0 2 0 0 0 4 0 1 0 0 0 0 0 0 0 6 0 0 0 2 2 0 2 6 0 0 1 3 0 0 0 0 0 0 0 0 20 0 5 10 4 60 13 23 10 539 329 469 374 0 0 0 0 1 8 11 19 6 3 6 3 5 14 0 0 MT1_WHEAT RecName: Full=Metallothionein-like pr...
Contig6300 0 0 2 5 21 30 0 0 0 0 0 54 0 2 4 0 0 0 0 6 55 53 6 11 16 0 0 11 97 116 49 109 0 74 0 0 0 0 0 0 0 0 66 1 48 0 20 47 23 63 85 0 2 2 0 0 11 0 0 0 0 153 207 206 120 10 6 25 21 0 0 hypothetical protein [Secale cereale]
Contig6477 0 0 3 10 18 18 0 1 2 0 0 66 0 0 3 0 0 0 0 8 56 57 16 16 16 0 0 34 91 131 100 167 3 103 0 0 0 0 0 0 0 0 37 1 32 0 24 49 16 56 74 0 4 2 0 0 19 0 0 0 0 144 131 119 89 9 6 13 15 0 0 hypothetical protein [Secale cereale]
Contig7521 0 0 0 0 4 1 0 0 0 0 0 24 0 2 0 0 0 0 0 0 45 38 0 0 0 0 0 3 10 58 105 66 0 67 0 0 0 0 0 0 0 0 51 2 49 0 41 76 14 86 77 0 0 0 1 0 2 0 0 0 0 101 110 109 41 11 7 13 14 0 0 Unknown (protein for MGC:35458) [Homo sapiens]
Contig32559 0 0 3 2 23 11 1 0 4 0 0 26 0 0 0 0 0 0 0 4 34 26 2 9 27 0 0 17 34 27 62 22 0 38 0 0 0 0 0 0 0 0 39 0 44 0 32 87 20 74 85 2 4 1 0 0 5 0 0 0 0 36 72 103 77 26 7 13 27 0 0 chloroplast oxygen-evolving enhancer protein 1...
Contig6670 0 0 0 0 5 2 2 1 0 0 0 36 0 0 0 0 0 0 0 1 17 35 6 5 10 0 0 7 61 33 3 58 0 44 0 0 0 0 0 0 0 0 46 0 19 0 14 64 14 93 107 0 0 0 0 0 1 0 0 0 0 74 102 97 54 22 12 23 46 0 0 chlorophyll a-b binding protein [Triticum aest...
Contig11598 0 51 38 9 57 60 3 50 72 0 0 0 0 11 74 15 0 13 0 12 2 0 2 3 3 1 3 1 3 1 1 2 9 0 0 0 0 0 0 0 0 0 16 15 16 28 15 30 27 55 47 48 41 21 36 0 0 19 8 11 16 12 19 18 14 4 14 10 14 0 0 hypothetical protein [Vitis vinifera]
Contig35299 0 1 10 5 19 11 0 1 8 0 0 10 0 0 2 0 0 0 0 3 4 20 0 1 8 0 0 2 25 9 14 2 0 5 0 0 0 0 0 0 0 0 63 4 43 0 23 47 60 110 132 0 2 0 0 0 0 0 0 0 0 72 52 70 78 8 22 36 47 0 0 chloroplast hypothetical protein [Zea mays sub...
Contig9283 0 11 17 14 12 4 6 11 17 0 0 2 0 93 11 21 0 28 0 8 22 15 15 41 2 4 22 12 2 3 18 5 28 23 0 0 0 0 0 0 0 0 19 9 9 12 20 24 9 28 15 19 28 28 16 0 22 11 20 8 23 26 13 27 15 9 5 5 3 1 0 S-adenosylmethionine decarboxylase precursor [...
Contig20503 0 0 1 0 3 1 2 0 0 0 0 23 0 0 1 0 0 0 0 0 9 13 0 3 3 0 0 1 18 34 56 37 0 31 0 0 0 0 0 0 0 0 18 0 17 0 11 76 32 60 53 0 0 0 0 0 2 0 0 0 0 70 90 98 79 16 3 10 11 0 0 Unknown (protein for MGC:35458) [Homo sapiens]
Contig32607 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 265 67 158 18 0 0 0 0 0 0 0 0 0 0 0 1 98 48 57 17 25 1 0 0 Photosystem II 10 kDa polypeptide, chloroplast...
Contig18019 0 0 0 2 9 2 0 1 0 0 0 14 0 4 0 0 0 0 0 4 9 13 4 0 8 0 0 16 35 26 31 23 1 22 0 0 0 0 0 0 0 0 36 0 37 0 25 56 21 36 96 5 2 0 2 0 2 0 0 0 0 26 35 46 68 8 2 4 22 0 0 PS II 10 kDa protein [Phyllostachys edulis]
Contig32726 0 0 1 2 12 3 0 1 0 0 0 14 0 1 2 0 0 0 0 2 14 6 2 8 2 0 1 10 15 17 36 18 0 23 0 0 0 0 0 0 0 0 38 2 15 0 38 35 29 49 98 0 0 0 0 0 2 0 0 0 0 43 62 35 36 17 12 14 12 0 0 glutamine-dependent asparagine synthetase [Tri...
Contig13359 0 0 0 0 5 3 0 1 0 0 0 4 0 0 3 0 0 0 0 0 11 20 0 0 1 0 0 2 8 34 55 50 0 25 0 0 0 0 0 0 0 0 12 0 10 0 10 74 21 53 54 0 0 1 1 0 0 0 0 0 0 63 48 69 49 10 4 7 16 0 1 Unknown (protein for MGC:35458) [Homo sapiens]
Contig32970 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 3 0 0 231 47 100 16 0 0 0 0 0 0 0 0 0 0 2 0 166 39 71 15 22 2 0 0 PSBR_HORVU RecName: Full=Photosystem II 10 kDa ...
Contig19884 0 0 0 0 13 3 0 0 0 0 0 1 0 0 1 0 0 0 0 0 12 21 0 0 1 0 0 0 7 32 43 52 0 35 0 0 0 0 0 0 0 0 37 0 24 0 15 55 15 32 55 0 0 1 0 0 2 0 0 0 0 39 66 50 34 6 5 5 4 0 0 Unknown (protein for MGC:35458) [Homo sapiens]
Contig7547 0 0 0 2 2 2 4 0 1 0 0 11 0 0 0 0 0 0 0 4 11 23 2 4 8 0 0 4 33 34 2 28 0 36 0 0 0 0 0 0 0 0 39 1 23 0 30 31 36 65 70 0 0 0 0 0 0 0 0 0 0 18 40 26 31 2 9 8 23 0 0 Os02g0197600 [Oryza sativa (japonica cultivar-...
Contig17554 0 2 0 0 1 0 0 3 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 9 6 29 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 4 3 0 2 26 52 144 20 36 20 34 58 0 3 0 0 0 10 43 18 26 64 10 11 13 8 0 0 wali5 [Triticum aestivum]
Contig18716 0 0 0 0 11 5 0 0 0 0 0 19 0 0 0 0 0 0 0 0 29 10 0 2 3 0 0 4 2 17 22 88 0 19 0 0 0 0 0 0 0 0 25 0 36 0 19 20 14 38 79 0 0 0 0 0 0 0 0 0 0 37 70 27 23 8 4 7 20 0 0 ribulose-1,5-bisphosphate carboxylase/oxygenas...
Contig29819 0 0 0 2 1 0