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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 20
First Previous 1-20 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
CJ695296 whsc1g02 2003 5' Shoot grown with cold treatment 260bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       unknown [Populus trichocarpa] 293 3.03941e-25
CJ695405 whsc1n16 2003 5' Shoot grown with cold treatment 374bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25340 MUGEST2003_all.Contig25340       alpha-tubulin [Solanum tuberosum] 448 3.2331e-43
CJ696462 whsc4n24 2003 5' Shoot grown with cold treatment 240bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig24393 MUGEST2003_all.Contig24393       PREDICTED: similar to Immunoglobulin-binding protein 1 (CD79a-binding protein 1) (B cell signal transduction molecule alpha 4) (Alpha 4 protein) isoform 1 [Canis familiaris] 78 2.54786
CJ696546 whsc5c20 2003 5' Shoot grown with cold treatment 772bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25369 MUGEST2003_all.Contig25369       alpha tubulin-2A [Triticum aestivum] 1097 5.51085e-118
CJ692953 whsc11e17 2003 5' Shoot grown with cold treatment 541bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25336 MUGEST2003_all.Contig25336       alpha tubulin-2A [Triticum aestivum] 843 6.94577e-89
CJ693249 whsc12j21 2003 5' Shoot grown with cold treatment 173bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig24393 MUGEST2003_all.Contig24393       PREDICTED: similar to Immunoglobulin-binding protein 1 (CD79a-binding protein 1) (B cell signal transduction molecule alpha 4) (Alpha 4 protein) isoform 1 [Canis familiaris] 78 2.54128
CJ693547 whsc13l21 2003 5' Shoot grown with cold treatment 714bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 974 8.59625e-104
CJ693586 whsc13o04 2003 5' Shoot grown with cold treatment 659bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 1016 9.93338e-109
CJ693768 whsc14j11 2003 5' Shoot grown with cold treatment 732bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 1024 1.44674e-109
CJ693896 whsc15b08 2003 5' Shoot grown with cold treatment 721bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25369 MUGEST2003_all.Contig25369       alpha tubulin-2A [Triticum aestivum] 974 8.75844e-104
CJ694443 whsc17d13 2003 5' Shoot grown with cold treatment 662bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 1146 8.4632e-124
CJ694444 whsc17d14 2003 5' Shoot grown with cold treatment 126bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       unknown [Zea mays] 213 5.68443e-16
CJ590383 rwhsc4n24 2003 3' Shoot grown with cold treatment 210bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig24393 MUGEST2003_all.Contig24393       PREDICTED: similar to Immunoglobulin-binding protein 1 (CD79a-binding protein 1) (B cell signal transduction molecule alpha 4) (Alpha 4 protein) isoform 1 [Canis familiaris] 78 2.54353
CJ587000 rwhsc12j21 2003 3' Shoot grown with cold treatment 157bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig24393 MUGEST2003_all.Contig24393            
CJ587317 rwhsc13l21 2003 3' Shoot grown with cold treatment 684bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 823 2.55414e-86
CJ587355 rwhsc13o04 2003 3' Shoot grown with cold treatment 714bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 847 4.57931e-89
CJ587538 rwhsc14j11 2003 3' Shoot grown with cold treatment 735bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 900 3.49037e-95
CJ588260 rwhsc17d13 2003 3' Shoot grown with cold treatment 730bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 882 4.19117e-93
CJ588261 rwhsc17d14 2003 3' Shoot grown with cold treatment 235bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 389 2.22128e-36
CJ589137 rwhsc1g02 2003 3' Shoot grown with cold treatment 664bp Wh_SHC_all.Contig2526 MUGEST2003_all.Contig25349 MUGEST2003_all.Contig25349       alpha tubulin-2A [Triticum aestivum] 747 1.55675e-77
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