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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 31
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_15033_a09r 2012 3' Crown of seedling 528bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 226 2.16557e-57
whdp_14063_a14f 2012 5' Seed DPA20 600bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 347 1.22591e-93
whdp_14063_a14r 2012 3' Seed DPA20 529bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 283 1.99392e-74
whhg_16032_a08f 2012 5' Anther at meiosis of MT4B CS wheat 700bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 395 5.80177e-108
whhg_16032_a08r 2012 3' Anther at meiosis of MT4B CS wheat 678bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 292 8.28917e-77
whms_20078_c20f 2012 5' Seed DPA5 of DT3DL CS wheat 604bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 336 3.80469e-90
whms_20078_c20r 2012 3' Seed DPA5 of DT3DL CS wheat 647bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 7.45231e-93
whms_11077_d17f 2012 5' Seed DPA5 of DT3DL CS wheat 555bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.99966e-86
whms_11077_d17r 2012 3' Seed DPA5 of DT3DL CS wheat 577bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 276 3.16554e-72
whms_14002_o03f 2012 5' Seed DPA5 of DT3DL CS wheat 680bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 340 2.05508e-91
whms_14002_o03r 2012 3' Seed DPA5 of DT3DL CS wheat 620bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 333 2.65017e-89
whv3_6014_d04f 2012 5' Shoot grown under cold condition for 3days 663bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 379 5.00629e-103
whv3_6014_d04r 2012 3' Shoot grown under cold condition for 3days 679bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 332 7.22806e-89
whv3_16073_h18f 2012 5' Shoot grown under cold condition for 3days 713bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 421 1.32296e-115
whv3_16073_h18r 2012 3' Shoot grown under cold condition for 3days 740bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 281 1.36544e-73
whvs_7040_i11f 2012 5' Liquid cultured tissue 724bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 9.8602e-114
whvs_7040_i11r 2012 3' Liquid cultured tissue 661bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 354 1.30515e-95
whxc_28085_k22f 2012 5' Root, treated at 50 microM Al for 6h 310bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 152 4.6753e-35
whxc_28085_k22r 2012 3' Root, treated at 50 microM Al for 6h 361bp Contig9965       conservedhypotheticalprotein[TalaromycesstipitatusATCC10500] 39 0.580052
HX009190 whxi_8050_o15f 2012 5' Two-week old seedlingsi22Ž 16L-8Dj 251bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 134 1.00645e-29
HX009200 whxi_8050_o15r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 165bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 3.42681e-09
HX044217 whxm_4057_g13f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 401bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 225 5.79275e-57
HX044232 whxm_4057_g13r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22Ž 16L-8D) 432bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 159 2.9613e-37
HX067029 whxn_8036_m11f 2012 5' Leaves, plant was grown at constant 23Ž 606bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 358 7.15871e-97
HX067055 whxn_8036_m11r 2012 3' Leaves, plant was grown at constant 23Ž 612bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 325 5.29569e-87
HX099853 whxp_12086_k23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23Ž ) 52bp Contig9965       PREDICTED:50SribosomalproteinL19,chloroplastic-like[Brachypodiumdistachyon] 39 0.23475
HX122229 whxq_20068_n20f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 550bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.9612e-86
HX122246 whxq_20068_n20r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 634bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 199 4.80418e-49
HX123492 whxq_30082_o23r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 75bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 49 0.000320254
whxy_2095_b21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 624bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 389 4.12622e-106
whxy_2095_b21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27Ž ) 734bp Contig9965       predictedprotein[Hordeumvulgaresubsp.vulgare] 415 1.01446e-113
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