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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 16
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whok_13081_o21f 2012 5' Seed DPA5 471bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.4193e-31
whok_13081_o21r 2012 3' Seed DPA5 440bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.34048e-31
whsc_2027_f06f 2012 5' Shoot grown with cold treatment 386bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 136 2.04833e-30
whsc_2027_f06r 2012 3' Shoot grown with cold treatment 351bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 136 2.07597e-30
whxa_14080_a20r 2012 3' Root 716bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 1.32457e-30
whxa_13010_g04f 2012 5' Root 375bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.477e-31
whxc_19069_k17f 2012 5' Root, treated at 50 microM Al for 6h 155bp Contig9950            
whxc_19069_k17r 2012 3' Root, treated at 50 microM Al for 6h 129bp Contig9950            
whxc_29002_p03f 2012 5' Root, treated at 50 microM Al for 6h 270bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 136 2.06155e-30
whxc_29002_p03r 2012 3' Root, treated at 50 microM Al for 6h 319bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 112 5.49374e-23
whxh_11066_p19f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 495bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.41283e-31
whxh_11066_p19r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 472bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.4435e-31
HX019897 whxk_11016_a03f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 317bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.5014e-31
HX019910 whxk_11016_a03r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22℃ 16L-8D) 304bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 120 1.52418e-25
whxw_7024_i08f 2012 5' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 507bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.47517e-31
whxw_7024_i08r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23℃ ) 465bp Contig9950       PREDICTED:mitochondrialimportinnermembranetranslocasesubunitTim8-like[Brachypodiumdistachyon] 138 5.46771e-31
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