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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 92
First Previous 1-92 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_13061_c13f 2012 5' Callus 671bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 343 4.00282e-92
whcs_13061_c13r 2012 3' Callus 758bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 328 1.75286e-87
whcs_20012_e03r 2012 3' Callus 124bp Contig9768       cationtransportproteinchaC[Zeamays] 89 2.90176e-16
whdp_9031_b05f 2012 5' Seed DPA20 521bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 269 2.78089e-70
whdp_9031_b05r 2012 3' Seed DPA20 641bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 249 4.15469e-64
whdp_20042_h11f 2012 5' Seed DPA20 435bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 82 4.58102e-14
whdp_20042_h11r 2012 3' Seed DPA20 408bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 107 1.33138e-21
whdp_20066_o19f 2012 5' Seed DPA20 160bp Contig9768            
whdp_20066_o19r 2012 3' Seed DPA20 125bp Contig9768            
whei_12080_b19f 2012 5' Dormant seed with water absorption after breaking 79bp Contig9768       cationtransportproteinchaC[Zeamays] 55 7.94019e-06
whei_13058_g16f 2012 5' Dormant seed with water absorption after breaking 569bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 296 3.66434e-78
whei_13058_g16r 2012 3' Dormant seed with water absorption after breaking 631bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 248 1.16234e-63
whei_12052_n16f 2012 5' Dormant seed with water absorption after breaking 521bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 267 1.05674e-69
whei_12052_n16r 2012 3' Dormant seed with water absorption after breaking 635bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 249 4.04816e-64
whem_20032_a07f 2012 5' Dormant seed with water absorption 323bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 208 5.61168e-52
whem_20032_a07r 2012 3' Dormant seed with water absorption 598bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 227 2.41481e-57
whem_19048_b12f 2012 5' Dormant seed with water absorption 565bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 312 4.87593e-83
whem_19048_b12r 2012 3' Dormant seed with water absorption 635bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 247 1.5383e-63
whem_20072_i20f 2012 5' Dormant seed with water absorption 510bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 269 2.67347e-70
whem_20072_i20r 2012 3' Dormant seed with water absorption 636bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 245 7.63451e-63
whem_15087_j22f 2012 5' Dormant seed with water absorption 164bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 46 0.00280982
whem_15087_j22r 2012 3' Dormant seed with water absorption 676bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 281 1.12031e-73
whem_8018_p07r 2012 3' Dormant seed with water absorption 45bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 36 2.29011
whms_17076_e19f 2012 5' Seed DPA5 of DT3DL CS wheat 571bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 297 9.81522e-79
whms_17076_e19r 2012 3' Seed DPA5 of DT3DL CS wheat 678bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 283 2.98133e-74
whpc_8050_p16f 2012 5' Anther at meiosis 667bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 353 2.97599e-95
whpc_8050_p16r 2012 3' Anther at meiosis 758bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 321 1.25619e-85
whsh_2076_h17r 2012 3' - 80bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 47 0.00215601
whsl_2002_a01f 2012 5' Seed DPA30 59bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 38 0.584493
whsl_2003_b01f 2012 5' Seed DPA30 458bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 214 7.70189e-54
whsl_2002_b01r 2012 3' Seed DPA30 456bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 99 4.73682e-19
whsl_3095_l18r 2012 3' Seed DPA30 477bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 141 8.28608e-32
whsl_1065_n04f 2012 5' Seed DPA30 559bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 279 2.63296e-73
whsl_1056_n04r 2012 3' Seed DPA30 513bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 185 3.86926e-45
whxa_22009_h02f 2012 5' Root 583bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 312 5.3822e-83
whxa_22009_h02r 2012 3' Root 572bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 187 1.43052e-45
whxc_26010_h03f 2012 5' Root, treated at 50 microM Al for 6h 348bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 44 0.014076
whxc_26010_h03r 2012 3' Root, treated at 50 microM Al for 6h 311bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 53 2.26311e-05
whxc_14089_h22f 2012 5' Root, treated at 50 microM Al for 6h 413bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 72 6.17323e-11
whxc_15089_h22f 2012 5' Root, treated at 50 microM Al for 6h 402bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 66 2.62592e-09
whxc_16089_h22f 2012 5' Root, treated at 50 microM Al for 6h 413bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 72 6.17323e-11
whxc_14089_h22r 2012 3' Root, treated at 50 microM Al for 6h 372bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 79 3.94333e-13
whxc_15089_h22r 2012 3' Root, treated at 50 microM Al for 6h 375bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 79 3.92774e-13
whxc_16089_h22r 2012 3' Root, treated at 50 microM Al for 6h 371bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 79 3.95893e-13
whxd_35044_f11f 2012 5' Root, treated at 50 microM Al for 6h 594bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 314 1.50925e-83
whxd_35044_f11r 2012 3' Root, treated at 50 microM Al for 6h 491bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 138 5.43768e-31
whxd_34053_k14f 2012 5' Root, treated at 50 microM Al for 6h 571bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 310 1.87759e-82
whxd_34053_k14r 2012 3' Root, treated at 50 microM Al for 6h 498bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 177 1.36699e-42
whxe_17063_a14f 2012 5' Seedling, infected with leaf rust 558bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 297 9.16992e-79
whxe_17063_a14r 2012 3' Seedling, infected with leaf rust 490bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 159 2.97684e-37
whxe_14079_a17f 2012 5' Seedling, infected with leaf rust 368bp Contig9768       hypotheticalproteinOsI_07148[OryzasativaIndicaGroup] 149 3.02348e-34
whxe_14079_a17r 2012 3' Seedling, infected with leaf rust 553bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 229 5.1325e-58
whxe_20076_e19f 2012 5' Seedling, infected with leaf rust 600bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 314 1.50205e-83
whxe_21076_e19f 2012 5' Seedling, infected with leaf rust 244bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 152 3.60844e-35
whxe_20076_e19r 2012 3' Seedling, infected with leaf rust 542bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 189 4.26687e-46
whxe_21076_e19r 2012 3' Seedling, infected with leaf rust 165bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 103 1.93072e-20
whxe_7072_j19f 2012 5' Seedling, infected with leaf rust 683bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 312 6.05984e-83
whxe_7072_j19r 2012 3' Seedling, infected with leaf rust 676bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 282 6.5679e-74
whxe_7072_j20f 2012 5' Seedling, infected with leaf rust 596bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 289 3.04809e-76
whxe_7072_j20r 2012 3' Seedling, infected with leaf rust 281bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 113 1.84259e-23
whxe_40069_k17f 2012 5' Seedling, infected with leaf rust 355bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 175 6.85236e-42
whxe_40069_k17r 2012 3' Seedling, infected with leaf rust 688bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 287 1.63353e-75
whxf_35048_a12f 2012 5' Seedling, infected with leaf rust 582bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 310 2.0117e-82
whxf_39061_c13f 2012 5' Seedling, infected with leaf rust 574bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 297 9.81522e-79
whxf_40061_c13f 2012 5' Seedling, infected with leaf rust 43bp Contig9768       hypotheticalproteinVOLCADRAFT_121703[Volvoxcarterif.nagariensis] 27 0.851906
whxf_6026_h08f 2012 5' Seedling, infected with leaf rust 265bp Contig9768            
whxf_6026_h08r 2012 3' Seedling, infected with leaf rust 238bp Contig9768            
whxg_19079_a18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 529bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 198 6.45902e-49
whxg_19079_a18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 682bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 286 4.65063e-75
whxg_33084_m24r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 362bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 61 8.35652e-08
whxh_32069_l18f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 581bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 312 5.29396e-83
whxh_32069_l18r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 652bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 265 7.69195e-69
whxh_31051_n13r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 446bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 130 2.53871e-28
whxh_32051_n13r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 40bp Contig9768            
HX034002 whxl_18009_g01f 2012 5' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 420bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 217 1.21193e-54
HX034013 whxl_18009_g01r 2012 3' Roots, two-week old seedlings treated with 150-mM NaCl for 24h (22 16L-8D) 483bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 125 4.68391e-27
HX050115 whxn_28015_a02f 2012 5' Leaves, plant was grown at constant 23 57bp Contig9768       cationtransportproteinchaC[Zeamays] 44 0.0131797
HX050145 whxn_28015_a02r 2012 3' Leaves, plant was grown at constant 23 535bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 183 2.93303e-44
HX055937 whxn_28028_e08f 2012 5' Leaves, plant was grown at constant 23 581bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 314 1.39315e-83
HX055962 whxn_28028_e08r 2012 3' Leaves, plant was grown at constant 23 634bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 286 3.90282e-75
HX065660 whxn_27038_l11f 2012 5' Leaves, plant was grown at constant 23 509bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 269 2.67347e-70
HX065685 whxn_27038_l11r 2012 3' Leaves, plant was grown at constant 23 631bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 245 7.53405e-63
HX067335 whxn_9052_m16r 2012 3' Leaves, plant was grown at constant 23 679bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 284 1.74782e-74
HX068723 whxn_15067_n17f 2012 5' Leaves, plant was grown at constant 23 592bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 307 1.06496e-81
HX100281 whxp_17021_l06f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 583bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 314 1.39315e-83
HX100305 whxp_17021_l06r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 746bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 326 4.92266e-87
HX101750 whxp_13020_m08f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 568bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 310 1.87759e-82
HX101781 whxp_13020_m08r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 739bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 324 2.39907e-86
HX140963 whxr_13052_n15r 2012 3' Roots, 18 day old plants were grown hydroponically 763bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 339 7.63222e-91
whxx_8095_b21f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 622bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 338 8.23829e-91
whxx_8095_b21r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 760bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 333 5.49632e-89
whxy_4084_n23f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (27 ) 624bp Contig9768       PREDICTED:cationtransportregulator-likeprotein2-like[Brachypodiumdistachyon] 343 3.39116e-92
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