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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 51
First Previous 1-51 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_11077_d17f 2012 5' Callus 680bp Contig9658       actin[Deschampsiaantarctica] 316 5.42067e-84
whcs_11077_d17r 2012 3' Callus 660bp Contig9658       actin[Deschampsiaantarctica] 328 1.29279e-87
whcs_19089_h21f 2012 5' Callus 765bp Contig9658       PREDICTED:actin-97-like[Brachypodiumdistachyon] 346 3.46156e-95
whcs_19089_h21r 2012 3' Callus 695bp Contig9658       actin[Deschampsiaantarctica] 345 8.80704e-93
whcs_13090_h24r 2012 3' Callus 673bp Contig9658       actin[Deschampsiaantarctica] 343 4.04883e-92
whcs_11024_i07r 2012 3' Callus 319bp Contig9658       actin[Deschampsiaantarctica] 192 4.19278e-47
whcs_10086_k24r 2012 3' Callus 166bp Contig9658            
whcs_18052_n16r 2012 3' Callus 718bp Contig9658       actin[Deschampsiaantarctica] 311 1.94744e-82
whdl_25028_h14r 2012 3' Crown of seedling 484bp Contig9658       actin[Deschampsiaantarctica] 173 2.01033e-41
whdp_20049_o14r 2012 3' Seed DPA20 614bp Contig9658       actin[Deschampsiaantarctica] 308 6.79615e-82
whe_9051_b22r 2012 3' Seed DPA10 494bp Contig9658       actin[Deschampsiaantarctica] 178 4.71993e-43
whei_16047_a09r 2012 3' Dormant seed with water absorption after breaking 635bp Contig9658       actin[Deschampsiaantarctica] 307 1.25259e-81
whf_2093_k24r 2012 3' Spike at flowering date 409bp Contig9658       actin[Deschampsiaantarctica] 64 1.29254e-08
whh_15082_b06r 2012 3' Spike at heading date 482bp Contig9658       actin[Deschampsiaantarctica] 181 9.39408e-44
whkv_1069_l17f 2012 5' Shoot grown with continuous light after cold treatment 484bp Contig9658       actin[Deschampsiaantarctica] 120 2.01968e-25
whkv_1069_l17r 2012 3' Shoot grown with continuous light after cold treatment 479bp Contig9658       actin[Deschampsiaantarctica] 130 2.49487e-28
whms_19056_i16r 2012 3' Seed DPA5 of DT3DL CS wheat 705bp Contig9658       actin[Deschampsiaantarctica] 346 3.15439e-93
whok_16021_l06r 2012 3' Seed DPA5 673bp Contig9658       actin[Deschampsiaantarctica] 287 1.54571e-75
whok_8049_o13r 2012 3' Seed DPA5 656bp Contig9658       actin[Deschampsiaantarctica] 214 1.57607e-53
whsl_28061_h04r 2012 3' Seed DPA30 570bp Contig9658       actin[Deschampsiaantarctica] 257 1.88632e-66
whsl_20006_i01f 2012 5' Seed DPA30 567bp Contig9658       actin[Deschampsiaantarctica] 175 7.21806e-42
whsl_14063_l10f 2012 5' Seed DPA30 614bp Contig9658       actin[Deschampsiaantarctica] 285 6.16113e-75
whsl_14062_l10r 2012 3' Seed DPA30 538bp Contig9658       actin[Deschampsiaantarctica] 210 1.34148e-52
whsp_5095_a21f 2012 5' 576bp Contig9658       actin[Deschampsiaantarctica] 249 3.17289e-64
whsp_5095_a21r 2012 3' 558bp Contig9658       actin[Deschampsiaantarctica] 214 1.04019e-53
whsp_14039_j09r 2012 3' 557bp Contig9658       actin[Deschampsiaantarctica] 213 2.97046e-53
whsp_8069_k18r 2012 3' 657bp Contig9658       actin[Deschampsiaantarctica] 336 3.63482e-90
whsp_10052_m15r 2012 3' 748bp Contig9658       actin[Deschampsiaantarctica] 336 4.79979e-90
whsp_10066_o19f 2012 5' 393bp Contig9658       actin[Deschampsiaantarctica] 51 8.59629e-05
whsp_10066_o19r 2012 3' 401bp Contig9658       actin[Deschampsiaantarctica] 92 4.48709e-17
whsp_1017_p06f 2012 5' 623bp Contig9658       actin[Deschampsiaantarctica] 323 2.78058e-86
whsp_1017_p06r 2012 3' 558bp Contig9658       actin[Deschampsiaantarctica] 213 2.97046e-53
whxa_24026_g07r 2012 3' Root 644bp Contig9658       actin[Deschampsiaantarctica] 318 7.37625e-85
whxb_16008_j03f 2012 5' Root 623bp Contig9658       actin[Deschampsiaantarctica] 291 1.5293e-76
whxb_16008_j03r 2012 3' Root 549bp Contig9658       actin[Deschampsiaantarctica] 206 3.4256e-51
whxc_38014_d03r 2012 3' Root, treated at 50 microM Al for 6h 509bp Contig9658       actin[Deschampsiaantarctica] 200 1.52515e-49
whxc_10043_e10f 2012 5' Root, treated at 50 microM Al for 6h 497bp Contig9658       actin[Deschampsiaantarctica] 101 1.24502e-19
whxc_10043_e10r 2012 3' Root, treated at 50 microM Al for 6h 488bp Contig9658       actin[Deschampsiaantarctica] 126 3.66406e-27
whxc_6085_k22r 2012 3' Root, treated at 50 microM Al for 6h 577bp Contig9658       actin[Deschampsiaantarctica] 195 7.10133e-48
whxd_10047_b10r 2012 3' Root, treated at 50 microM Al for 6h 611bp Contig9658       actin[Deschampsiaantarctica] 284 1.03592e-74
whxd_21078_d19r 2012 3' Root, treated at 50 microM Al for 6h 536bp Contig9658       actin[Deschampsiaantarctica] 197 1.15071e-48
whxd_28089_g21r 2012 3' Root, treated at 50 microM Al for 6h 391bp Contig9658       actin[Deschampsiaantarctica] 141 8.2493e-32
whxd_29089_g21r 2012 3' Root, treated at 50 microM Al for 6h 310bp Contig9658       actin[Deschampsiaantarctica] 88 8.32165e-16
whxd_39057_h13r 2012 3' Root, treated at 50 microM Al for 6h 681bp Contig9658       actin[Deschampsiaantarctica] 321 1.29021e-85
whxd_4058_h15r 2012 3' Root, treated at 50 microM Al for 6h 588bp Contig9658       actin[Deschampsiaantarctica] 197 1.50363e-48
whxd_21056_j15r 2012 3' Root, treated at 50 microM Al for 6h 153bp Contig9658            
HX019864 whxk_8015_a01r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22 16L-8D) 245bp Contig9658       PREDICTED:proteinfurry-like[Acyrthosiphonpisum] 37 2.202
HX050572 whxn_9047_a09r 2012 3' Leaves, plant was grown at constant 23 555bp Contig9658       actin[Deschampsiaantarctica] 214 1.02093e-53
HX096547 whxp_26040_i11r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 475bp Contig9658       actin[Deschampsiaantarctica] 193 1.41319e-47
whxx_9047_b09f 2012 5' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 771bp Contig9658       actin[Deschampsiaantarctica] 346 3.72343e-93
whxx_9047_b09r 2012 3' Leaves, seedling were infercted with blast strain Pr58 for 4 days (23 ) 732bp Contig9658       actin[Deschampsiaantarctica] 345 9.87156e-93
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