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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 70
First Previous 1-70 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whdl_8025_c20r 2012 3' Crown of seedling 479bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55185e-54
whdl_18027_g20f 2012 5' Crown of seedling 186bp Contig9622            
whdl_18027_g20r 2012 3' Crown of seedling 136bp Contig9622            
whdl_11021_i02f 2012 5' Crown of seedling 112bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 78 6.75069e-13
whdl_24031_l08f 2012 5' Crown of seedling 377bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.74276e-53
whei_12030_d08f 2012 5' Dormant seed with water absorption after breaking 411bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55819e-54
whei_12030_d08r 2012 3' Dormant seed with water absorption after breaking 472bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56584e-54
whei_12043_f10f 2012 5' Dormant seed with water absorption after breaking 44bp Contig9622            
whei_12043_f10r 2012 3' Dormant seed with water absorption after breaking 184bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 99 2.8453e-19
whem_18038_l11f 2012 5' Dormant seed with water absorption 501bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.54962e-54
whem_18038_l11r 2012 3' Dormant seed with water absorption 467bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.57983e-54
whkv_12077_d17f 2012 5' Shoot grown with continuous light after cold treatment 385bp Contig9622       celldivisionAAAATPasefamilyprotein[Triticumaestivum] 269 2.03285e-70
whms_10079_b17f 2012 5' Seed DPA5 of DT3DL CS wheat 524bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.67689e-54
whms_10079_b17r 2012 3' Seed DPA5 of DT3DL CS wheat 495bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56397e-54
whms_14005_k01f 2012 5' Seed DPA5 of DT3DL CS wheat 534bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.79388e-54
whms_14005_k01r 2012 3' Seed DPA5 of DT3DL CS wheat 508bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.57462e-54
whoh_20026_c14f 2012 5' Pistil at heading date 488bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.99765e-54
whoh_20026_c14r 2012 3' Pistil at heading date 474bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 212 2.95305e-53
whr_6002_a19f 2012 5' Root 278bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 183 2.4819e-44
whr_6001_a19r 2012 3' Root 491bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.57115e-54
whr_13083_b12f 2012 5' Root 417bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 5.87215e-54
whr_17034_b15f 2012 5' Root 558bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 2.05711e-54
whr_17034_b15r 2012 3' Root 505bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.58199e-54
whr_24055_m04f 2012 5' Root 451bp Contig9622       celldivisionAAAATPasefamilyprotein[Triticumaestivum] 311 4.67006e-83
whsc_5067_n18r 2012 3' Shoot grown with cold treatment 516bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.64562e-54
whxa_28024_j08f 2012 5' Root 500bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.54962e-54
whxa_28024_j08r 2012 3' Root 456bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55869e-54
whxa_22019_m05r 2012 3' Root 120bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 77 1.49483e-12
whxa_23036_m11f 2012 5' Root 493bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56397e-54
whxa_23036_m11r 2012 3' Root 454bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.5655e-54
whxa_23036_m12f 2012 5' Root 493bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56397e-54
whxa_23036_m12r 2012 3' Root 456bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55869e-54
whxb_8015_a02f 2012 5' Root 531bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.75488e-54
whxb_8015_a02r 2012 3' Root 472bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 214 1.01495e-53
whxb_29021_l06f 2012 5' Root 512bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 194 1.08788e-47
whxb_29021_l06r 2012 3' Root 486bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.58551e-54
whxc_8016_a03f 2012 5' Root, treated at 50 microM Al for 6h 497bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55679e-54
whxc_9016_a03f 2012 5' Root, treated at 50 microM Al for 6h 53bp Contig9622            
whxc_8016_a03r 2012 3' Root, treated at 50 microM Al for 6h 475bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55885e-54
whxc_7078_d20f 2012 5' Root, treated at 50 microM Al for 6h 267bp Contig9622            
whxc_8078_d20f 2012 5' Root, treated at 50 microM Al for 6h 267bp Contig9622            
whxc_7078_d20r 2012 3' Root, treated at 50 microM Al for 6h 224bp Contig9622            
whxc_8078_d20r 2012 3' Root, treated at 50 microM Al for 6h 224bp Contig9622            
whxc_35042_h11f 2012 5' Root, treated at 50 microM Al for 6h 506bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.58199e-54
whxc_36042_h11f 2012 5' Root, treated at 50 microM Al for 6h 492bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.57115e-54
whxc_35042_h11r 2012 3' Root, treated at 50 microM Al for 6h 474bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56584e-54
whxc_36042_h11r 2012 3' Root, treated at 50 microM Al for 6h 474bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56584e-54
whxc_27035_m09f 2012 5' Root, treated at 50 microM Al for 6h 313bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 194 8.18415e-48
whxc_27035_m09r 2012 3' Root, treated at 50 microM Al for 6h 307bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 164 9.13687e-39
whxd_17055_j13f 2012 5' Root, treated at 50 microM Al for 6h 258bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 167 1.10596e-39
whxd_17055_j13r 2012 3' Root, treated at 50 microM Al for 6h 456bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55869e-54
whxd_2019_n06r 2012 3' Root, treated at 50 microM Al for 6h 49bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 36 2.44279
whxg_31020_n07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 384bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 211 8.58052e-53
whxg_32020_n07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 243bp Contig9622       PREDICTED:60SribosomalproteinL36-3-like[Brachypodiumdistachyon] 161 7.76813e-38
whxg_32020_n07r 2012 3' Seedling, infected with powdery mildew (AvrPm3b) 447bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 213 1.74592e-53
HX131296 whxr_15060_f15f 2012 5' Roots, 18 day old plants were grown hydroponically 804bp Contig9622       celldivisionAAAATPasefamilyprotein[Triticumaestivum] 554 1.67875e-155
HX137749 whxr_17086_k23r 2012 3' Roots, 18 day old plants were grown hydroponically 136bp Contig9622            
HX146893 whxs_19077_c17r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 443bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 3.53309e-54
HX147789 whxs_11046_d12f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 480bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 3.45716e-54
HX147811 whxs_11046_d12r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 450bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 215 3.50274e-54
HX173178 whxt_9008_i04r 2012 3' Roots, 18 day old plants were grown hydroponically 334bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 143 1.67214e-32
HX179727 whxt_19051_n13f 2012 5' Roots, 18 day old plants were grown hydroponically 791bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 4.71361e-54
HX179754 whxt_19051_n13r 2012 3' Roots, 18 day old plants were grown hydroponically 719bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 3.86508e-54
HX179843 whxt_26052_n15f 2012 5' Roots, 18 day old plants were grown hydroponically 521bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.63789e-54
HX179872 whxt_26052_n15r 2012 3' Roots, 18 day old plants were grown hydroponically 501bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.54962e-54
HX192015 whxu_10074_h20f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 716bp Contig9622       celldivisionAAAATPasefamilyprotein[Triticumaestivum] 299 7.65806e-79
whyd_18020_f14f 2012 5' Spikelet at late flowering 636bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 2.90785e-54
whyd_18021_f14r 2012 3' Spikelet at late flowering 461bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 180 1.22707e-43
whyd_17072_m05f 2012 5' Spikelet at late flowering 474bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.56584e-54
whyd_17071_m05r 2012 3' Spikelet at late flowering 458bp Contig9622       predictedprotein[Hordeumvulgaresubsp.vulgare] 217 1.55188e-54
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