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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 19
First Previous 1-19 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ277186 whr10e18 2002 5' Root 637bp Contig16266 Contig16266 Q42806 Q42806 Q42806 Q42806 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity unknown [Zea mays] 778 3.62752e-81
BJ277392 whr11e11 2002 5' Root 566bp Contig16266 Contig16266 P13615 P13615 GO:0003968 GO:0016740 RNA-directed RNA polymerase activity ,  transferase activity hypothetical protein [Lilium longiflorum] 292 1.61471e-27
BJ278248 whr15g07 2002 5' Root 584bp Contig16266 Contig16266 Q91661 Q91661 Q91661 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein [Lilium longiflorum] 288 1.46381e-26
BJ278264 whr15h09 2002 5' Root 598bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity pyruvate kinase-like [Deschampsia antarctica] 720 1.65682e-74
BJ278376 whr15o17 2002 5' Root 614bp Contig16266 Contig16266 P48534 P48534 P48534 GO:0004601 GO:0004601 GO:0016491 peroxidase activity ,  peroxidase activity ,  oxidoreductase activity ascorbate peroxidase [Hordeum vulgare] 887 7.65727e-94
BJ278749 whr17j11 2002 5' Root 565bp Contig16266 Contig16266 P13615 P13615 GO:0003968 GO:0016740 RNA-directed RNA polymerase activity ,  transferase activity hypothetical protein [Lilium longiflorum] 292 1.61471e-27
BJ278773 whr17l05 2002 5' Root 617bp Contig16266 Contig16266 O60187 GO:0007067 mitosis hypothetical protein [Lilium longiflorum] 327 6.69056e-29
BJ280801 whr19c04 2002 5' Root 534bp Contig16266 Contig16266 Q91661 Q91661 Q91661 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein [Lilium longiflorum] 295 1.80378e-27
BJ280929 whr19l23 2002 5' Root 635bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity unknown [Zea mays] 714 7.19747e-85
BJ280557 whr8o21 2002 5' Root 138bp Contig16266 Contig16266 Q91661 Q91661 Q91661 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein [Lilium longiflorum] 199 2.35935e-14
BJ280589 whr9b21 2002 5' Root 650bp Contig16266 Contig16266 Q91661 Q91661 Q91661 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein [Lilium longiflorum] 295 6.81322e-30
BJ280717 whr9m11 2002 5' Root 674bp Contig16266 Contig16266 Q91661 Q91661 Q91661 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein [Lilium longiflorum] 292 2.26873e-28
BJ282364 rwhr10e18 2002 3' Root 701bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity pyruvate kinase-like [Deschampsia antarctica] 765 1.44143e-79
BJ283316 rwhr15h09 2002 3' Root 525bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity pyruvate kinase-like [Deschampsia antarctica] 592 8.0651e-60
BJ283427 rwhr15o17 2002 3' Root 607bp Contig16266 Contig16266 P48534 P48534 P48534 GO:0004601 GO:0004601 GO:0016491 peroxidase activity ,  peroxidase activity ,  oxidoreductase activity ascorbate peroxidase [Hordeum vulgare] 574 1.4488e-57
BJ283711 rwhr17d17 2002 3' Root 635bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity pyruvate kinase-like [Deschampsia antarctica] 699 5.18703e-72
BJ283824 rwhr17l05 2002 3' Root 683bp Contig16266 Contig16266 Q91661 Q91661 Q91661 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein [Oryza sativa Japonica Group] 190 1.45733e-19
BJ287573 rwhr20l23 2002 3' Root 726bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity pyruvate kinase-like [Deschampsia antarctica] 865 3.88748e-91
BJ286991 rwhr24c02 2002 3' Root 567bp Contig16266 Contig16266 Q42954 Q42954 Q42954 Q42954 GO:0000287 GO:0006096 GO:0016301 GO:0016740 magnesium ion binding ,  glycolysis ,  kinase activity ,  transferase activity pyruvate kinase-like [Deschampsia antarctica] 595 4.5392e-60
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