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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 22
First Previous 1-22 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ243242 whf10e01 2002 5' Spike at flowering date 606bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity Orf122 [Chlorobium tepidum] 223 7.37382e-17
BJ243461 whf11e15 2002 5' Spike at flowering date 505bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 147 3.18956e-12
BJ244788 whf16j02 2002 5' Spike at flowering date 635bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity Orf122 [Chlorobium tepidum] 223 8.13342e-17
BJ245655 whf1j04 2002 5' Spike at flowering date 677bp Contig16253 Contig16253       Orf122 [Chlorobium tepidum] 223 9.37935e-17
BJ246093 whf21g22 2002 5' Spike at flowering date 698bp Contig16253 Contig16253       unknown [Zea mays] 293 7.69282e-25
BJ246600 whf24m16 2002 5' Spike at flowering date 655bp Contig16253 Contig16253       Orf122 [Chlorobium tepidum] 223 8.82774e-17
BJ247423 whf2c09 2002 5' Spike at flowering date 564bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.13273e-15
BJ247519 whf2j04 2002 5' Spike at flowering date 250bp Contig16253 Contig16253 O15061 O15061 GO:0005871 GO:0005882 kinesin complex ,  intermediate filament      
BJ247648 whf3c09 2002 5' Spike at flowering date 460bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 7.33677e-16
BJ247690 whf3f04 2002 5' Spike at flowering date 603bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chlorophyll a/b binding protein 2 988 1.42878e-105
BJ244485 whf9p16 2002 5' Spike at flowering date 681bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chloroplast chlorophyll a-b binding protein precursor [Oryza sativa (indica cultivar-group)] 808 1.38706e-84
BJ249284 rwhf10e01 2002 3' Spike at flowering date 666bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.71301e-15
BJ249519 rwhf11e15 2002 3' Spike at flowering date 573bp Contig16253 Contig16253       hypothetical protein SsuiDRAFT_1635 [Streptococcus suis 89/1591] 197 6.52627e-14
BJ250652 rwhf16j02 2002 3' Spike at flowering date 676bp Contig16253 Contig16253 O80585 GO:0016491 oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 197 9.70611e-14
BJ251543 rwhf1j04 2002 3' Spike at flowering date 715bp Contig16253 Contig16253 P38114 P38114 P38114 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein SsuiDRAFT_1635 [Streptococcus suis 89/1591] 192 7.47842e-24
BJ251728 rwhf20f13 2002 3' Spike at flowering date 472bp Contig16253 Contig16253 P30175 GO:0003779 actin binding hypothetical protein [Oryza sativa (japonica cultivar-group)] 157 1.77414e-09
BJ253596 rwhf2j04 2002 3' Spike at flowering date 610bp Contig16253 Contig16253 P38114 P38114 P38114 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent hypothetical protein SsuiDRAFT_1635 [Streptococcus suis 89/1591] 192 4.52182e-22
BJ253794 rwhf3f04 2002 3' Spike at flowering date 588bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chloroplast chlorophyll a-b binding protein precursor [Oryza sativa (indica cultivar-group)] 679 9.0519e-70
BJ253896 rwhf3l03 2002 3' Spike at flowering date 240bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane unknown [Zea mays] 225 2.29378e-17
BJ254719 rwhf6m16 2002 3' Spike at flowering date 236bp Contig16253 Contig16253 Q43261 Q43261 Q43261 Q43261 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome unknown [Zea mays] 144 5.70135e-08
BJ254993 rwhf7m16 2002 3' Spike at flowering date 231bp Contig16253 Contig16253 P30755 P30755 P30755 P30755 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome unknown [Zea mays] 144 5.7398e-08
BJ250293 rwhf9p16 2002 3' Spike at flowering date 689bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chloroplast chlorophyll a-b binding protein precursor [Oryza sativa (indica cultivar-group)] 747 1.69361e-77
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