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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 17
First Previous 1-17 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ222024 whdl11c21 2002 5' Crown of seedling 401bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 421 4.35736e-40
BJ222301 whdl12l23 2002 5' Crown of seedling 463bp Contig16253 Contig16253 P93354 P93354 P93354 P93354 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Os12g0525300 [Oryza sativa (japonica cultivar-group)] 106 0.00142893
BJ222559 whdl14a24 2002 5' Crown of seedling 637bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.5526e-15
BJ225947 whdl24i04 2002 5' Crown of seedling 452bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane unknown [Zea mays] 654 4.15255e-67
BJ226228 whdl25j04 2002 5' Crown of seedling 563bp Contig16253 Contig16253       Orf122 [Chlorobium tepidum] 223 6.00625e-17
BJ226237 whdl25j15 2002 5' Crown of seedling 399bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 7.48442e-16
BJ226558 whdl26p24 2002 5' Crown of seedling 632bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.51519e-15
BJ223408 whdl4k20 2002 5' Crown of seedling 400bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 421 4.35736e-40
BJ223535 whdl5g14 2002 5' Crown of seedling 488bp Contig16253 Contig16253       unknown [Zea mays] 737 9.94691e-77
BJ223815 whdl6p05 2002 5' Crown of seedling 615bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chlorophyll a/b binding protein 2 961 2.03686e-102
BJ223819 whdl6p12 2002 5' Crown of seedling 599bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.33426e-15
BJ226856 rwhdl10f02 2002 3' Crown of seedling 435bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 416 1.62742e-39
BJ227012 rwhdl11c21 2002 3' Crown of seedling 654bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 565 1.94394e-56
BJ230856 rwhdl24i04 2002 3' Crown of seedling 599bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chloroplast chlorophyll a-b binding protein precursor [Oryza sativa (indica cultivar-group)] 700 3.45468e-72
BJ231852 rwhdl4k20 2002 3' Crown of seedling 492bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 447 4.30675e-43
BJ228241 rwhdl5g14 2002 3' Crown of seedling 667bp Contig16253 Contig16253       unknown [Zea mays] 661 1.46046e-67
BJ228554 rwhdl6p05 2002 3' Crown of seedling 691bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chloroplast chlorophyll a-b binding protein precursor [Oryza sativa (indica cultivar-group)] 737 2.44556e-76
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