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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 6
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ293421 whsl16a12 2002 5' Seed DPA30 638bp Contig16253 Contig16253 Q18007 O95104 GO:0016021 GO:0003723 integral to membrane ,  RNA binding virion core protein [Orf virus] 85 0.827089
BJ293612 whsl17f22 2002 5' Seed DPA30 582bp Contig16253 Contig16253 Q9QY14 Q9Y615 Q9Y615 GO:0006355 GO:0005198 GO:0005856 regulation of transcription, DNA-dependent ,  structural molecule activity ,  cytoskeleton EMB2766 (EMBRYO DEFECTIVE 2766); structural constituent of nuclear pore [Arabidopsis thaliana] 110 0.000837713
BJ290057 whsl8j15 2002 5' Seed DPA30 656bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.66484e-15
BJ294878 rwhsl16a12 2002 3' Seed DPA30 673bp Contig16253 Contig16253 Q9UMW0 Q9UMW0 Q9UMW0 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent sigma-54-dependent transcriptional regulator variant [Symbiobacterium thermophilum IAM 14863] 63 0.807771
BJ300057 rwhsl17f22 2002 3' Seed DPA30 622bp Contig16253 Contig16253       predicted protein [Nematostella vectensis] 87 0.45778
BJ296389 rwhsl8j15 2002 3' Seed DPA30 641bp Contig16253 Contig16253 Q9UMW0 Q9UMW0 Q9UMW0 GO:0003677 GO:0005634 GO:0006355 DNA binding ,  nucleus ,  regulation of transcription, DNA-dependent GUN4-like [Trichodesmium erythraeum IMS101] 89 0.287691
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