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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 17
First Previous 1-17 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ312441 whyf10c02 2002 5' Spikelet at early flowering 659bp Contig16253 Contig16253 P31007 P31007 GO:0004871 GO:0007165 signal transducer activity ,  signal transduction proteophosphoglycan 5 [Leishmania major strain Friedlin] 102 0.00958195
BJ312830 whyf12d20 2002 5' Spikelet at early flowering 659bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 565 1.96578e-56
BJ312848 whyf12f18 2002 5' Spikelet at early flowering 282bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 346 4.17232e-36
BJ315068 whyf15k11 2002 5' Spikelet at early flowering 609bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.40943e-15
BJ315232 whyf16g03 2002 5' Spikelet at early flowering 615bp Contig16253 Contig16253 O83245 O83245 GO:0003754 GO:0003773 chaperone activity ,  heat shock protein activity Os12g0525300 [Oryza sativa (japonica cultivar-group)] 187 1.13165e-12
BJ315283 whyf16k11 2002 5' Spikelet at early flowering 465bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 206 3.62534e-15
BJ315586 whyf19c24 2002 5' Spikelet at early flowering 628bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 447 8.41909e-43
BJ313802 whyf7i11 2002 5' Spikelet at early flowering 675bp Contig16253 Contig16253 P03915 P03915 P03915 GO:0005739 GO:0007601 GO:0016491 mitochondrion ,  vision ,  oxidoreductase activity hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.75025e-15
BJ313986 whyf8i11 2002 5' Spikelet at early flowering 540bp Contig16253 Contig16253 P02276 P02276 P02276 P02276 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2A.2.1 287 2.02063e-24
BJ314116 whyf9e04 2002 5' Spikelet at early flowering 640bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane chlorophyll a/b binding protein 2 977 3.08633e-104
BJ314228 whyf9m09 2002 5' Spikelet at early flowering 600bp Contig16253 Contig16253       hypothetical protein BMULJ_05098 [Burkholderia multivorans ATCC 17616] 212 1.35306e-15
BJ318136 rwhyf10c02 2002 3' Spikelet at early flowering 621bp Contig16253 Contig16253       predicted protein [Nematostella vectensis] 87 0.45778
BJ318582 rwhyf12f18 2002 3' Spikelet at early flowering 197bp Contig16253 Contig16253 P30755 P30755 P30755 P30755 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome      
BJ320548 rwhyf15k11 2002 3' Spikelet at early flowering 700bp Contig16253 Contig16253 O83245 O83245 GO:0003754 GO:0003773 chaperone activity ,  heat shock protein activity hypothetical protein [Flammeovirga yaeyamensis] 253 3.37744e-20
BJ321115 rwhyf19c24 2002 3' Spikelet at early flowering 576bp Contig16253 Contig16253 P05621 P05621 P05621 P05621 GO:0000786 GO:0003677 GO:0005634 GO:0005694 nucleosome ,  DNA binding ,  nucleus ,  chromosome Histone H2B.2 586 5.18056e-59
BJ319585 rwhyf9e04 2002 3' Spikelet at early flowering 602bp Contig16253 Contig16253 P27519 P27519 P27519 P27519 P27519 P27519 P27519 GO:0009507 GO:0009522 GO:0009523 GO:0009579 GO:0015979 GO:0016020 GO:0016021 chloroplast ,  photosystem I ,  photosystem II ,  thylakoid ,  photosynthesis ,  membrane ,  integral to membrane unknown [Zea mays] 627 1.02168e-63
BJ319699 rwhyf9m09 2002 3' Spikelet at early flowering 546bp Contig16253 Contig16253 Q9HMT9 Q9HMT9 Q9HMT9 Q9HMT9 Q9HMT9 Q9HMT9 Q9HMT9 Q9HMT9 GO:0005524 GO:0006281 GO:0006281 GO:0009432 GO:0004518 GO:0006284 GO:0006310 GO:0006289 ATP binding ,  DNA repair ,  DNA repair ,  SOS response ,  nuclease activity ,  base-excision repair ,  DNA recombination ,  nucleotide-excision repair hypothetical protein [Oryza sativa (japonica cultivar-group)] 184 1.8747e-12
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