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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 25
First Previous 1-25 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ208659 wh10d01 2002 5' Spike at meiosis 557bp Contig16238 Contig16238 Q9PU53 GO:0000781 chromosome, telomeric region unnamed protein product [Kluyveromyces lactis] 231 7.00865e-18
BJ209713 wh15f16 2002 5' Spike at meiosis 382bp Contig16238 Contig16238 O82628 GO:0015992 proton transport non-cell-autonomous heat shock cognate protein 70 [Cucurbita maxima] 133 5.32012e-07
BJ209746 wh15h20 2002 5' Spike at meiosis 362bp Contig16238 Contig16238 Q9XHS0 GO:0003735 structural constituent of ribosome non-cell-autonomous heat shock cognate protein 70 [Cucurbita maxima] 170 5.46594e-11
BJ212508 wh17m11 2002 5' Spike at meiosis 513bp Contig16238 Contig16238 Q9K896 GO:0004812 tRNA ligase activity hypothetical protein OsJ_023714 [Oryza sativa (japonica cultivar-group)] 680 4.62853e-70
BJ213175 wh21d04 2002 5' Spike at meiosis 660bp Contig16238 Contig16238 Q01105 GO:0005634 nucleus phosphotransferase [Streptomyces avermitilis MA-4680] 83 1.52978
BJ213542 wh23a07 2002 5' Spike at meiosis 417bp Contig16238 Contig16238 O67622 GO:0016021 integral to membrane unknown [Zea mays] 278 1.62989e-23
BJ213710 wh23o11 2002 5' Spike at meiosis 534bp Contig16238 Contig16238 Q8TEK3 GO:0016740 transferase activity unknown [Zea mays] 594 4.89888e-60
BJ211736 wh32p04 2002 5' Spike at meiosis 552bp Contig16238 Contig16238 P59258 GO:0003677 DNA binding hypothetical protein OsJ_033519 [Oryza sativa (japonica cultivar-group)] 705 7.36573e-73
BJ207649 wh4l22 2002 5' Spike at meiosis 586bp Contig16238 Contig16238 Q03033 GO:0003746 translation elongation factor activity Endoplasmin homolog precursor (GRP94 homolog) 591 1.44851e-59
BJ207881 wh5m20 2002 5' Spike at meiosis 549bp Contig16238 Contig16238 Q24255 GO:0003677 DNA binding repressor protein [Triticum aestivum] 426 1.65621e-40
BJ208095 wh6m22 2002 5' Spike at meiosis 595bp Contig16238 Contig16238 P05621 GO:0000786 nucleosome unknown [Zea mays] 383 3.12641e-37
BJ215901 rwh10d01 2002 3' Spike at meiosis 289bp Contig16238 Contig16238 P15340 Q09750 Q09750 Q09750 GO:0003677 GO:0000910 GO:0005634 GO:0006355 DNA binding ,  cytokinesis ,  nucleus ,  regulation of transcription, DNA-dependent      
BJ216962 rwh14i11 2002 3' Spike at meiosis 723bp Contig16238 Contig16238 P05621 P22953 P22953 GO:0003677 GO:0003773 GO:0005524 DNA binding ,  heat shock protein activity ,  ATP binding unknown [Zea mays] 703 2.34788e-72
BJ217185 rwh15h20 2002 3' Spike at meiosis 345bp Contig16238 Contig16238 Q9LST7 P22953 P22953 GO:0005829 GO:0003773 GO:0005524 cytosol ,  heat shock protein activity ,  ATP binding non-cell-autonomous heat shock cognate protein 70 [Cucurbita maxima] 170 5.57165e-11
BJ219969 rwh17m11 2002 3' Spike at meiosis 678bp Contig16238 Contig16238 P00303 P09296 P09296 P09296 GO:0006118 GO:0004674 GO:0005524 GO:0016740 electron transport ,  protein serine/threonine kinase activity ,  ATP binding ,  transferase activity Os07g0551400 [Oryza sativa (japonica cultivar-group)] 493 4.61194e-48
BJ220340 rwh19i21 2002 3' Spike at meiosis 662bp Contig16238 Contig16238 P24389 P32112 P32112 GO:0016787 GO:0006730 GO:0016787 hydrolase activity ,  one-carbon compound metabolism ,  hydrolase activity putative S-adenosylhomocystein hydrolase 2 [Hordeum vulgare subsp. vulgare] 887 9.12643e-94
BJ220660 rwh21d04 2002 3' Spike at meiosis 625bp Contig16238 Contig16238 P26480 Q9Y2N3 Q9Y2N3 Q9Y2N3 GO:0003677 GO:0005634 GO:0006810 GO:0016021 DNA binding ,  nucleus ,  transport ,  integral to membrane phosphotransferase [Streptomyces avermitilis MA-4680] 83 1.34901
BJ221046 rwh23a07 2002 3' Spike at meiosis 404bp Contig16238 Contig16238 O04433 GO:0005786 signal recognition particle hypothetical protein OsJ_034873 [Oryza sativa (japonica cultivar-group)] 139 2.17387e-07
BJ221219 rwh23o23 2002 3' Spike at meiosis 634bp Contig16238 Contig16238 P59258 P36183 P36183 P36183 GO:0005634 GO:0003754 GO:0005509 GO:0005783 nucleus ,  chaperone activity ,  calcium ion binding ,  endoplasmic reticulum Endoplasmin homolog precursor (GRP94 homolog) 656 4.96278e-67
BJ219181 rwh32p04 2002 3' Spike at meiosis 619bp Contig16238 Contig16238 Q9XF89 P22953 P22953 GO:0009522 GO:0003773 GO:0005524 photosystem I ,  heat shock protein activity ,  ATP binding unknown [Zea mays] 523 1.26931e-51
BJ219277 rwh33g24 2002 3' Spike at meiosis 642bp Contig16238 Contig16238 Q38774 P36183 P36183 P36183 GO:0000910 GO:0003754 GO:0005509 GO:0005783 cytokinesis ,  chaperone activity ,  calcium ion binding ,  endoplasmic reticulum Endoplasmin homolog precursor (GRP94 homolog) 720 1.95117e-74
BJ218133 rwh36d07 2002 3' Spike at meiosis 461bp Contig16238 Contig16238 P33240 P22953 P22953 GO:0005634 GO:0003773 GO:0005524 nucleus ,  heat shock protein activity ,  ATP binding hypothetical protein OsI_019552 [Oryza sativa (indica cultivar-group)] 283 4.29125e-24
BJ215371 rwh6m22 2002 3' Spike at meiosis 534bp Contig16238 Contig16238 Q12852 O89106 GO:0016740 GO:0016787 transferase activity ,  hydrolase activity ATPase-like protein [Sorghum bicolor] 392 1.29818e-36
BJ215455 rwh7c08 2002 3' Spike at meiosis 299bp Contig16238 Contig16238 Q9FIZ9 P34367 GO:0016021 GO:0005509 integral to membrane ,  calcium ion binding hypothetical protein [Tetrahymena thermophila SB210] 77 3.35179
BJ218722 rwh9p21 2002 3' Spike at meiosis 662bp Contig16238 Contig16238 P21569 P22953 P22953 GO:0003755 GO:0003773 GO:0005524 peptidyl-prolyl cis-trans isomerase activity ,  heat shock protein activity ,  ATP binding unknown [Zea mays] 563 3.39038e-56
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