Japanese | English  
Genome / Development
cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 30
First Previous 1-30 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ208643 wh10b19 2002 5' Spike at meiosis 133bp Contig16150 Contig16150 Q40787 GO:0005525 GTP binding Os11g0211800 [Oryza sativa (japonica cultivar-group)] 173 2.4565e-11
BJ208913 wh11j17 2002 5' Spike at meiosis 654bp Contig16150 Contig16150 P46465 GO:0005524 ATP binding Os11g0211800 [Oryza sativa (japonica cultivar-group)] 347 3.65023e-31
BJ209782 wh15k05 2002 5' Spike at meiosis 135bp Contig16150 Contig16150 P43330 GO:0006371 mRNA splicing Os11g0211800 [Oryza sativa (japonica cultivar-group)] 182 2.20828e-12
BJ212659 wh18h08 2002 5' Spike at meiosis 412bp Contig16150 Contig16150 Q9WUA2 GO:0004812 tRNA ligase activity Os11g0211800 [Oryza sativa (japonica cultivar-group)] 347 1.63282e-31
BJ213176 wh21d05 2002 5' Spike at meiosis 662bp Contig16150 Contig16150 Q01105 GO:0008151 cell growth and/or maintenance Os11g0211800 [Oryza sativa (japonica cultivar-group)] 347 3.77467e-31
BJ213291 wh21l12 2002 5' Spike at meiosis 651bp Contig16150 Contig16150 P51422 GO:0003735 structural constituent of ribosome Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.24031e-31
BJ213403 wh22d19 2002 5' Spike at meiosis 552bp Contig16150 Contig16150 P56960 GO:0005634 nucleus Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 8.23876e-32
BJ213829 wh24h04 2002 5' Spike at meiosis 436bp Contig16150 Contig16150 Q9V411 GO:0005634 nucleus Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 5.60636e-32
BJ214132 wh25p10 2002 5' Spike at meiosis 648bp Contig16150 Contig16150 O14270 GO:0003677 DNA binding Os11g0211800 [Oryza sativa (japonica cultivar-group)] 347 3.56727e-31
BJ210378 wh27j20 2002 5' Spike at meiosis 551bp Contig16150 Contig16150 P36725 GO:0006260 DNA replication Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 8.23876e-32
BJ210386 wh27k15 2002 5' Spike at meiosis 515bp Contig16150 Contig16150 P48802 GO:0008083 growth factor activity Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 6.67911e-32
BJ207093 wh2b17 2002 5' Spike at meiosis 564bp Contig16150 Contig16150 P21569 GO:0003755 peptidyl-prolyl cis-trans isomerase activity Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 8.63288e-32
BJ211989 wh34f03 2002 5' Spike at meiosis 513bp Contig16150 Contig16150 P22807 GO:0003677 DNA binding Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 6.53391e-32
BJ207611 wh4j12 2002 5' Spike at meiosis 655bp Contig16150 Contig16150 P59258 GO:0003677 DNA binding Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.26882e-31
BJ210241 wh9p05 2002 5' Spike at meiosis 494bp Contig16150 Contig16150 O55013 Q62638 Q62638 GO:0005783 GO:0005794 GO:0016021 endoplasmic reticulum ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 341 8.42465e-31
BJ216295 rwh11j17 2002 3' Spike at meiosis 408bp Contig16150 Contig16150 Q40545 Q62638 Q62638 GO:0009507 GO:0005794 GO:0016021 chloroplast ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 312 1.87586e-27
BJ220123 rwh18h08 2002 3' Spike at meiosis 594bp Contig16150 Contig16150 Q91274 Q9ZM11 Q9ZM11 GO:0008289 GO:0006221 GO:0016491 lipid binding ,  pyrimidine nucleotide biosynthesis ,  oxidoreductase activity Os11g0211800 [Oryza sativa (japonica cultivar-group)] 359 1.16737e-32
BJ220661 rwh21d05 2002 3' Spike at meiosis 634bp Contig16150 Contig16150 P26480 Q62638 Q62638 GO:0003899 GO:0005794 GO:0016021 DNA-directed RNA polymerase activity ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 347 3.40135e-31
BJ220786 rwh21l12 2002 3' Spike at meiosis 667bp Contig16150 Contig16150 Q03684 Q62638 Q62638 GO:0005783 GO:0005794 GO:0016021 endoplasmic reticulum ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.29135e-31
BJ220900 rwh22d19 2002 3' Spike at meiosis 689bp Contig16150 Contig16150 Q9H2T7 Q62638 Q62638 GO:0006886 GO:0005794 GO:0016021 intracellular protein transport ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.40487e-31
BJ221330 rwh24h04 2002 3' Spike at meiosis 620bp Contig16150 Contig16150 Q03033 Q62638 Q62638 GO:0006412 GO:0005794 GO:0016021 protein biosynthesis ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.11714e-31
BJ221616 rwh25p10 2002 3' Spike at meiosis 647bp Contig16150 Contig16150 Q9AXQ6 Q62638 Q62638 GO:0006412 GO:0005794 GO:0016021 protein biosynthesis ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.22605e-31
BJ217598 rwh27j20 2002 3' Spike at meiosis 193bp Contig16150 Contig16150 Q00393 O42918 O42918 O42918 O42918 O42918 O42918 GO:0006118 GO:0005509 GO:0005975 GO:0005975 GO:0007126 GO:0016787 GO:0016798 electron transport ,  calcium ion binding ,  carbohydrate metabolism ,  carbohydrate metabolism ,  meiosis ,  hydrolase activity ,  hydrolase activity, acting on glycosyl bonds Bradykinin-potentiating and C-type natriuretic peptides precursor (BPP-CNP) [Contains: Bradykinin-potentiating peptide Tf1; Bradykinin-potentiating peptide Tf2; Bradykinin-potentiating peptide Tf3; C-type natriuretic peptide Tf-CNP; C-type natriuretic peptide Tf-CNP(3-22); C-type natriuretic peptide Tf-CNP(6-22)] 75 5.75942
BJ217606 rwh27k15 2002 3' Spike at meiosis 345bp Contig16150 Contig16150 P03993 Q9PNJ6 Q9PNJ6 GO:0005634 GO:0006221 GO:0016740 nucleus ,  pyrimidine nucleotide biosynthesis ,  transferase activity N-acetylmuramoyl-L-alanine amidase [Saccharophagus degradans 2-40] 80 1.52083
BJ217893 rwh29b01 2002 3' Spike at meiosis 635bp Contig16150 Contig16150 P49199 Q62638 Q62638 GO:0003735 GO:0005794 GO:0016021 structural constituent of ribosome ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 347 3.40135e-31
BJ218079 rwh29o23 2002 3' Spike at meiosis 287bp Contig16150 Contig16150 Q40078 Q62638 Q62638 GO:0016787 GO:0005794 GO:0016021 hydrolase activity ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 294 2.33832e-25
BJ214375 rwh2b17 2002 3' Spike at meiosis 579bp Contig16150 Contig16150 P11536 Q62638 Q62638 GO:0005634 GO:0005794 GO:0016021 nucleus ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 335 6.7023e-30
BJ218785 rwh30e21 2002 3' Spike at meiosis 452bp Contig16150 Contig16150 O65055 Q9PNJ6 Q9PNJ6 GO:0003735 GO:0006221 GO:0016740 structural constituent of ribosome ,  pyrimidine nucleotide biosynthesis ,  transferase activity unknown [Oryza sativa (indica cultivar-group)] 136 4.82889e-07
BJ219438 rwh34f03 2002 3' Spike at meiosis 539bp Contig16150 Contig16150 P59258 Q62638 Q62638 GO:0005634 GO:0005794 GO:0016021 nucleus ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 282 7.67839e-24
BJ214894 rwh4j12 2002 3' Spike at meiosis 693bp Contig16150 Contig16150 P11178 Q62638 Q62638 GO:0016491 GO:0005794 GO:0016021 oxidoreductase activity ,  Golgi apparatus ,  integral to membrane Os11g0211800 [Oryza sativa (japonica cultivar-group)] 351 1.41906e-31
page-top