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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 35
First Previous 1-35 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ209637 wh15a13 2002 5' Spike at meiosis 563bp Contig15884 Contig15884 Q9UL18 GO:0003743 translation initiation factor activity Os01g0686800 [Oryza sativa (japonica cultivar-group)] 723 6.31379e-75
BJ211581 wh31l02 2002 5' Spike at meiosis 360bp Contig15884 Contig15884 Q40680 GO:0003746 translation elongation factor activity unknown [Zea mays] 511 1.57201e-50
BJ208479 wh8g23 2002 5' Spike at meiosis 691bp Contig15884 Contig15884 Q8ZW41 GO:0009098 leucine biosynthesis Os01g0686800 [Oryza sativa (japonica cultivar-group)] 913 9.64666e-97
BJ217079 rwh15a13 2002 3' Spike at meiosis 569bp Contig15884 Contig15884 Q9NP61 GO:0005096 GTPase activator activity guanine nucleotide-binding protein beta subunit [Oryza sativa (indica cultivar-group)] 452 1.73291e-43
BJ219036 rwh31l02 2002 3' Spike at meiosis 663bp Contig15884 Contig15884 O29740 GO:0006810 transport Os01g0686800 [Oryza sativa (japonica cultivar-group)] 685 2.41846e-70
BJ215753 rwh8g23 2002 3' Spike at meiosis 646bp Contig15884 Contig15884 P21569 GO:0003755 peptidyl-prolyl cis-trans isomerase activity Os01g0686800 [Oryza sativa (japonica cultivar-group)] 772 1.86539e-80
BJ287657 whsl10d05 2002 5' Seed DPA30 629bp Contig15884 Contig15884 P27824 GO:0016021 integral to membrane Os01g0686800 [Oryza sativa (japonica cultivar-group)] 939 7.49212e-100
BJ290009 whsl8f10 2002 5' Seed DPA30 646bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 913 8.2377e-97
BJ293957 rwhsl10d05 2002 3' Seed DPA30 731bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 772 2.40691e-80
BJ296339 rwhsl8f10 2002 3' Seed DPA30 703bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 691 5.54347e-71
BJ232515 whe12n04 2002 5' Seed DPA10 583bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 774 8.59856e-81
BJ238160 rwhe12n04 2002 3' Seed DPA10 686bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 681 7.54294e-70
BJ244103 whf14d23 2002 5' Spike at flowering date 525bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 748 6.56714e-78
BJ245292 whf18n12 2002 5' Spike at flowering date 549bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 748 7.47127e-78
BJ246132 whf21k01 2002 5' Spike at flowering date 692bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 967 5.28104e-103
BJ249887 rwhf14d23 2002 3' Spike at flowering date 648bp Contig15884 Contig15884       guanine nucleotide-binding protein beta subunit [Oryza sativa (indica cultivar-group)] 180 8.35822e-12
BJ251161 rwhf18n12 2002 3' Spike at flowering date 575bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 857 1.95043e-90
BJ252050 rwhf21k01 2002 3' Spike at flowering date 644bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 800 1.04449e-83
BJ254739 rwhf6n19 2002 3' Spike at flowering date 140bp Contig15884 Contig15884       predicted protein [Nematostella vectensis] 73 9.59389
BJ260911 whh27h05 2002 5' Spike at heading date 481bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 742 2.57341e-77
BJ266600 rwhh27h05 2002 3' Spike at heading date 555bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 800 7.35044e-84
BJ268707 whoh18d24 2002 5' Pistil at heading date 657bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 911 1.47126e-96
BJ276425 rwhoh18d24 2002 3' Pistil at heading date 644bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 800 1.04449e-83
BJ277237 whr10i21 2002 5' Root 588bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 774 8.68697e-81
BJ282419 rwhr10i21 2002 3' Root 679bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 772 2.07268e-80
BJ303196 whyd18j10 2002 5' Spikelet at late flowering 666bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 913 8.77846e-97
BJ305767 whyd27h06 2002 5' Spikelet at late flowering 485bp Contig15884 Contig15884       guanine nucleotide-binding protein beta subunit [Oryza sativa (indica cultivar-group)] 427 8.56962e-41
BJ301215 whyd6j02 2002 5' Spikelet at late flowering 676bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 933 4.39509e-99
BJ309056 rwhyd18j10 2002 3' Spikelet at late flowering 625bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 765 1.11582e-79
BJ306179 rwhyd1o01 2002 3' Spikelet at late flowering 512bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 691 2.45426e-71
BJ311356 rwhyd27h06 2002 3' Spikelet at late flowering 425bp Contig15884 Contig15884       guanine nucleotide-binding protein beta subunit [Oryza sativa (indica cultivar-group)] 427 8.77526e-41
BJ307020 rwhyd6j02 2002 3' Spikelet at late flowering 585bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 702 1.92001e-72
BJ314682 whyf13n07 2002 5' Spikelet at early flowering 525bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 738 9.67645e-77
BJ315196 whyf16d10 2002 5' Spikelet at early flowering 653bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 913 8.52845e-97
BJ320677 rwhyf16d10 2002 3' Spikelet at early flowering 650bp Contig15884 Contig15884       Os01g0686800 [Oryza sativa (japonica cultivar-group)] 857 2.62711e-90
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