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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 27
First Previous 1-27 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
BJ214267 wh26j20 2002 5' Spike at meiosis 519bp Contig15667 Contig15667 Q96564 GO:0003735 structural constituent of ribosome Os02g0149800 [Oryza sativa (japonica cultivar-group)] 594 4.53522e-60
BJ221754 rwh26j20 2002 3' Spike at meiosis 526bp Contig15667 Contig15667 Q9ZD08 P35182 P35182 P35182 P35182 GO:0016787 GO:0000287 GO:0003773 GO:0016787 GO:0030145 hydrolase activity ,  magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 237 1.20223e-18
BJ217978 rwh29g22 2002 3' Spike at meiosis 669bp Contig15667 Contig15667 P02275 P35182 P35182 P35182 P35182 GO:0003677 GO:0000287 GO:0003773 GO:0016787 GO:0030145 DNA binding ,  magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 484 4.93807e-47
BJ287698 whsl10h12 2002 5' Seed DPA30 654bp Contig15667 Contig15667 P49397 P49593 P49593 P49593 P49593 GO:0003735 GO:0000287 GO:0006915 GO:0016787 GO:0030145 structural constituent of ribosome ,  magnesium ion binding ,  apoptosis ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 1001 5.39007e-107
BJ293998 rwhsl10h12 2002 3' Seed DPA30 713bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 635 1.75229e-64
BJ224725 whdl1a07 2002 5' Crown of seedling 528bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 703 1.10713e-72
BJ229362 rwhdl19g19 2002 3' Crown of seedling 546bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 272 1.1506e-22
BJ229508 rwhdl1a07 2002 3' Crown of seedling 267bp Contig15667 Contig15667 P81824 P81824 GO:0004252 GO:0016787 serine-type endopeptidase activity ,  hydrolase activity hypothetical protein pMOL30_158 [Ralstonia metallidurans CH34] 75 5.73222
BJ253588 rwhf2i14 2002 3' Spike at flowering date 621bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 395 8.94433e-37
BJ253683 rwhf2o04 2002 3' Spike at flowering date 652bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 334 1.17424e-29
BJ254086 rwhf4f22 2002 3' Spike at flowering date 580bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 326 7.41026e-29
BJ254854 rwhf7e09 2002 3' Spike at flowering date 662bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding Os02g0149800 [Oryza sativa (japonica cultivar-group)] 365 1.42586e-40
BJ260549 whh25j08 2002 5' Spike at heading date 681bp Contig15667 Contig15667 Q9WVR7 Q9WVR7 Q9WVR7 Q9WVR7 GO:0000287 GO:0006915 GO:0016787 GO:0030145 magnesium ion binding ,  apoptosis ,  hydrolase activity ,  manganese ion binding Os02g0149800 [Oryza sativa (japonica cultivar-group)] 892 2.52195e-94
BJ262971 rwhh10e24 2002 3' Spike at heading date 677bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 489 1.34187e-47
BJ264229 rwhh12i13 2002 3' Spike at heading date 609bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding unknown [Zea mays] 232 1.19374e-26
BJ263285 rwhh13m07 2002 3' Spike at heading date 641bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 514 1.50439e-50
BJ261971 rwhh16i11 2002 3' Spike at heading date 591bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 323 1.7444e-28
BJ265838 rwhh23k14 2002 3' Spike at heading date 680bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 494 3.56841e-48
BJ265846 rwhh23l01 2002 3' Spike at heading date 568bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 275 5.79562e-23
BJ266238 rwhh25j08 2002 3' Spike at heading date 641bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 426 2.40737e-40
BJ276948 rwhoh27d22 2002 3' Pistil at heading date 681bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 494 3.56841e-48
BJ303940 whyd21m22 2002 5' Spikelet at late flowering 571bp Contig15667 Contig15667 Q9WVR7 Q9WVR7 Q9WVR7 Q9WVR7 GO:0000287 GO:0006915 GO:0016787 GO:0030145 magnesium ion binding ,  apoptosis ,  hydrolase activity ,  manganese ion binding Os02g0149800 [Oryza sativa (japonica cultivar-group)] 650 1.93336e-66
BJ311535 rwhyd28e07 2002 3' Spikelet at late flowering 505bp Contig15667 Contig15667 P36982 P36982 P36982 GO:0000287 GO:0016787 GO:0030145 magnesium ion binding ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 224 3.34107e-17
BJ319895 rwhyf17j22 2002 3' Spikelet at early flowering 675bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 477 3.27035e-46
BJ322174 rwhyf23p23 2002 3' Spikelet at early flowering 674bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 490 1.01662e-47
BJ322991 rwhyf28c14 2002 3' Spikelet at early flowering 736bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 611 1.14331e-61
BJ318831 rwhyf3j16 2002 3' Spikelet at early flowering 664bp Contig15667 Contig15667 P35182 P35182 P35182 P35182 GO:0000287 GO:0003773 GO:0016787 GO:0030145 magnesium ion binding ,  heat shock protein activity ,  hydrolase activity ,  manganese ion binding hypothetical protein OsJ_005234 [Oryza sativa (japonica cultivar-group)] 483 6.37922e-47
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