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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 67
First Previous 1-67 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_9036_m12f 2012 5' Callus 650bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 420 2.41046e-115
whcs_9036_m12r 2012 3' Callus 722bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 421 1.04334e-115
whdl_13090_d06r 2012 3' Crown of seedling 188bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 95 6.9856e-18
whdl_26061_k04f 2012 5' Crown of seedling 579bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 227 7.63778e-82
whdl_26061_k04r 2012 3' Crown of seedling 560bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 313 2.14891e-83
whe_13051_b10f 2012 5' Seed DPA10 523bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.16484e-94
whe_13050_b10r 2012 3' Seed DPA10 446bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 146 5.04986e-58
whe_14050_b10r 2012 3' Seed DPA10 446bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 146 5.04986e-58
whei_4040_j11f 2012 5' Dormant seed with water absorption after breaking 419bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 287 9.57604e-76
whei_4040_j11r 2012 3' Dormant seed with water absorption after breaking 642bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 366 3.97775e-99
whem_3075_f18f 2012 5' Dormant seed with water absorption 440bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 301 6.22134e-80
whem_3075_f18r 2012 3' Dormant seed with water absorption 622bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 269 2.64211e-93
whf_9071_whr_j11r 2012 3' 272bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 104 1.12984e-20
whhg_19008_i03r 2012 3' Anther at meiosis of MT4B CS wheat 720bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 421 1.34942e-115
whms_3041_g09f 2012 5' Seed DPA5 of DT3DL CS wheat 529bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 354 5.39233e-96
whms_3041_g09r 2012 3' Seed DPA5 of DT3DL CS wheat 556bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 216 1.13305e-78
whms_15073_h17r 2012 3' Seed DPA5 of DT3DL CS wheat 622bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 349 2.73614e-94
whoh_5043_d15f 2012 5' Pistil at heading date 96bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 66 2.58329e-09
whpc_19047_a10f 2012 5' Anther at meiosis 690bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 463 1.6811e-128
whpc_19047_a10r 2012 3' Anther at meiosis 738bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 353 1.93435e-118
whpc_11018_o07f 2012 5' Anther at meiosis 737bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 497 1.20116e-138
whpc_11018_o07r 2012 3' Anther at meiosis 720bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 421 1.34942e-115
whsd_5067_m18f 2012 5' Shoot grown with dessication 43bp Contig9408            
whsl_24023_m14f 2012 5' Seed DPA30 503bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 308 3.8952e-82
whsl_24023_m14r 2012 3' Seed DPA30 531bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 292 3.28662e-77
whsl_7088_n18f 2012 5' Seed DPA30 176bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 130 1.9079e-28
whsp_11048_a12f 2012 5' 473bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 323 1.55138e-86
whsp_11048_a12r 2012 3' 595bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 370 1.74727e-100
whvh_19068_m19f 2012 5' Shoot with heat shock treatment 731bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 455 8.76333e-126
whvh_19068_m19r 2012 3' Shoot with heat shock treatment 726bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 347 1.71684e-116
whvs_12062_c16f 2012 5' Liquid cultured tissue 682bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 453 2.19956e-125
whvs_16005_l02f 2012 5' Liquid cultured tissue 699bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 465 5.96226e-129
whvs_16005_l02r 2012 3' Liquid cultured tissue 736bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 421 1.09399e-115
whvs_13003_m01f 2012 5' Liquid cultured tissue 704bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 290 5.39147e-100
whvs_13003_m01r 2012 3' Liquid cultured tissue 681bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 389 5.03841e-106
whxa_16058_g16f 2012 5' Root 610bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 383 2.14007e-104
whxa_16058_g16r 2012 3' Root 715bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 413 3.63879e-113
whxb_30059_f13f 2012 5' Root 315bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 221 8.42859e-56
whxb_30059_f13r 2012 3' Root 506bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 309 1.79331e-82
whxb_21041_g10f 2012 5' Root 602bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 255 9.06922e-90
whxb_21041_g10r 2012 3' Root 557bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 347 1.00916e-93
whxb_37074_h20r 2012 3' Root 781bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 453 2.92035e-125
whxb_38074_h20r 2012 3' Root 515bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 298 5.48298e-79
whxb_17020_m07f 2012 5' Root 292bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 205 3.65527e-51
whxb_31017_p05f 2012 5' Root 660bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 244 5.24872e-87
whxb_31017_p05r 2012 3' Root 626bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 252 1.72957e-89
whxc_38086_k23r 2012 3' Root, treated at 50 microM Al for 6h 499bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 268 4.48783e-70
whxc_21065_o17f 2012 5' Root, treated at 50 microM Al for 6h 528bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 355 4.03701e-96
whxc_21065_o17r 2012 3' Root, treated at 50 microM Al for 6h 487bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 262 4.27832e-68
whxd_19025_g06r 2012 3' Root, treated at 50 microM Al for 6h 596bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 332 4.10055e-89
HX047847 whxm_2035_m09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 365bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 242 2.63457e-62
HX047848 whxm_3035_m09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 354bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 245 5.3918e-63
HX047863 whxm_2035_m09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 371bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 174 1.18099e-41
HX047864 whxm_3035_m09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 24h (22℃ 16L-8D) 348bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 163 2.71543e-38
HX125670 whxr_11095_a22f 2012 5' Roots, 18 day old plants were grown hydroponically 722bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 290 1.49157e-100
HX125695 whxr_11095_a22r 2012 3' Roots, 18 day old plants were grown hydroponically 682bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 389 5.09439e-106
HX127193 whxr_20029_c05f 2012 5' Roots, 18 day old plants were grown hydroponically 742bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 500 2.46508e-139
HX127220 whxr_20029_c05r 2012 3' Roots, 18 day old plants were grown hydroponically 824bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 513 3.41985e-143
HX159300 whxs_21084_m23r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 339bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 156 2.48344e-36
HX165337 whxt_15095_b21f 2012 5' Roots, 18 day old plants were grown hydroponically 697bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 462 6.52409e-128
HX165361 whxt_15095_b21r 2012 3' Roots, 18 day old plants were grown hydroponically 877bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 510 1.92355e-142
HX172693 whxt_2074_h19f 2012 5' Roots, 18 day old plants were grown hydroponically 684bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 455 7.55978e-126
HX172717 whxt_2074_h19r 2012 3' Roots, 18 day old plants were grown hydroponically 782bp Contig9408       ChainC,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 453 2.92035e-125
whyd_5060_g10f 2012 5' Spikelet at late flowering 523bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 349 2.16484e-94
whyd_5060_g10r 2012 3' Spikelet at late flowering 536bp Contig9408       ribosomalproteinL3-A2-II[Triticumaestivum] 216 1.46699e-77
whyd_23054_j10f 2012 5' Spikelet at late flowering 609bp Contig9408       predictedprotein[Hordeumvulgaresubsp.vulgare] 345 4.87346e-93
whyd_23054_j10r 2012 3' Spikelet at late flowering 513bp Contig9408       ribosomalproteinL3-A3[Triticumaestivum] 316 1.89815e-84
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