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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 18
First Previous 1-18 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whxc_14080_a19f 2012 5' Root, treated at 50 microM Al for 6h 595bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 378 6.51633e-103
whxc_3080_a19f 2012 5' Root, treated at 50 microM Al for 6h 594bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 378 6.41608e-103
whxc_14080_a19r 2012 3' Root, treated at 50 microM Al for 6h 659bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 312 7.34092e-83
whxc_3080_a19r 2012 3' Root, treated at 50 microM Al for 6h 672bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 301 1.02264e-79
whxc_28095_a21f 2012 5' Root, treated at 50 microM Al for 6h 295bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 190 1.20807e-46
whxc_28062_c15f 2012 5' Root, treated at 50 microM Al for 6h 351bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 6.65246e-29
whxc_4014_d04f 2012 5' Root, treated at 50 microM Al for 6h 355bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 3.57834e-29
whxc_36029_d06f 2012 5' Root, treated at 50 microM Al for 6h 597bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 135 7.32531e-62
whxc_37029_d06f 2012 5' Root, treated at 50 microM Al for 6h 49bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 39 0.220941
whxc_25073_g18f 2012 5' Root, treated at 50 microM Al for 6h 386bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 2.50392e-28
whxc_33058_h15f 2012 5' Root, treated at 50 microM Al for 6h 127bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 76 3.30995e-12
whxc_33058_h15r 2012 3' Root, treated at 50 microM Al for 6h 105bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 42 6.62984e-06
whxc_35023_i05r 2012 3' Root, treated at 50 microM Al for 6h 529bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 260 1.80762e-67
whxc_29040_i12r 2012 3' Root, treated at 50 microM Al for 6h 402bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 180 2.13703e-43
whxc_34006_k03f 2012 5' Root, treated at 50 microM Al for 6h 449bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 287 1.23718e-75
whxc_34006_k03r 2012 3' Root, treated at 50 microM Al for 6h 506bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 249 2.87638e-64
whxc_3066_o19f 2012 5' Root, treated at 50 microM Al for 6h 140bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 78 8.57756e-13
whxc_3066_o19r 2012 3' Root, treated at 50 microM Al for 6h 111bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 44 1.2195e-08
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