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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List

*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 326
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Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whcs_10092_e23f 2012 5' Callus 737bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 416 4.59628e-114
whcs_10092_e23r 2012 3' Callus 735bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 413 2.25999e-113
whcs_14009_g02f 2012 5' Callus 739bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 399 4.49308e-109
whcs_14009_g02r 2012 3' Callus 756bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 412 7.00574e-113
whcs_19072_i19r 2012 3' Callus 715bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 389 4.30835e-106
whcs_2067_m17f 2012 5' Callus 594bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 376 3.23402e-102
whcs_2067_m17r 2012 3' Callus 619bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 329 4.998e-88
whdl_8025_c14f 2012 5' Crown of seedling 60bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 40 0.153814
whdl_3075_g05f 2012 5' Crown of seedling 576bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 2.51944e-61
whdl_25069_i11f 2012 5' Crown of seedling 512bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.26591e-49
whdl_22085_i12f 2012 5' Crown of seedling 439bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 278 5.66425e-73
whdl_22085_i12r 2012 3' Crown of seedling 400bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 225 5.79275e-57
whdl_7053_i16r 2012 3' Crown of seedling 609bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 322 5.77021e-86
whdl_22061_k04r 2012 3' Crown of seedling 539bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 314 1.12514e-83
whdl_8024_n14f 2012 5' Crown of seedling 412bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 2.02173e-33
whdl_20047_o09f 2012 5' Crown of seedling 127bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 76 3.30995e-12
whdl_20047_o09r 2012 3' Crown of seedling 56bp Contig9320            
whdp_18015_a01f 2012 5' Seed DPA20 567bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 2.38036e-58
whdp_18048_a11f 2012 5' Seed DPA20 160bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 106 2.29518e-21
whdp_6078_d20f 2012 5' Seed DPA20 581bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 6.74509e-61
whdp_9028_e07f 2012 5' Seed DPA20 561bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 7.94534e-59
whdp_6028_f07f 2012 5' Seed DPA20 567bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 2.38036e-58
whdp_12008_i03f 2012 5' Seed DPA20 552bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 4.75045e-55
whdp_13039_j09f 2012 5' Seed DPA20 567bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 2.85067e-59
whdp_12040_j11f 2012 5' Seed DPA20 599bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 132 3.59973e-61
whdp_19021_k05f 2012 5' Seed DPA20 561bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 4.24764e-57
whdp_13070_k20f 2012 5' Seed DPA20 511bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 124 1.16543e-50
whdp_12020_n07f 2012 5' Seed DPA20 560bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.2405e-59
whdp_11018_o08f 2012 5' Seed DPA20 554bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 9.86458e-56
whdp_12033_p09f 2012 5' Seed DPA20 507bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 5.63803e-47
whdp_15066_p20f 2012 5' Seed DPA20 543bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.01631e-54
whe_12009_c19f 2012 5' Seed DPA10 545bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.5805e-55
whe_24096_p12f 2012 5' Seed DPA10 545bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.31868e-54
whei_9075_f17f 2012 5' Dormant seed with water absorption after breaking 538bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 344 1.01529e-92
whei_9075_f17r 2012 3' Dormant seed with water absorption after breaking 657bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 337 1.61217e-90
whei_9073_h17f 2012 5' Dormant seed with water absorption after breaking 536bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 330 1.48554e-88
whem_10047_a09f 2012 5' Dormant seed with water absorption 568bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 363 2.44086e-98
whem_13048_b11f 2012 5' Dormant seed with water absorption 400bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 174 1.17263e-41
whem_13048_b11r 2012 3' Dormant seed with water absorption 468bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 216 2.69478e-54
whem_11095_b21f 2012 5' Dormant seed with water absorption 548bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 351 6.59308e-95
whem_11095_b21r 2012 3' Dormant seed with water absorption 666bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 351 8.55927e-95
whem_3027_e06f 2012 5' Dormant seed with water absorption 505bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 333 1.1597e-89
whem_2041_h09f 2012 5' Dormant seed with water absorption 353bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 6.65246e-29
whem_2041_h09r 2012 3' Dormant seed with water absorption 306bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 8.48487e-35
whem_4056_i15r 2012 3' Dormant seed with water absorption 250bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 168 6.31119e-40
whem_11053_l13f 2012 5' Dormant seed with water absorption 505bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 272 2.42936e-71
whem_11053_l13r 2012 3' Dormant seed with water absorption 562bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 303 1.73421e-80
whem_7002_o04f 2012 5' Dormant seed with water absorption 505bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 8.63558e-35
whem_4001_p02f 2012 5' Dormant seed with water absorption 399bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 215 4.58987e-54
whem_4001_p02r 2012 3' Dormant seed with water absorption 466bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 239 2.27599e-61
whem_6017_p05f 2012 5' Dormant seed with water absorption 587bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 339 2.44988e-91
whem_6017_p05r 2012 3' Dormant seed with water absorption 594bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 330 1.53423e-88
whf_4025_c20f 2012 5' Spike at flowering date 606bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 1.65172e-60
whf_20026_d08f 2012 5' Spike at flowering date 200bp Contig9320       unknown[Zeamays] 81 4.41815e-19
whf_19026_d08f 2012 5' Spike at flowering date 349bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 121 9.0258e-26
whf_23074_d23f 2012 5' Spike at flowering date 397bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.94978e-28
whf_10076_h11f 2012 5' Spike at flowering date 467bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 5.8492e-40
whf_9077_h11f 2012 5' Spike at flowering date 547bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 5.50187e-40
whf_26046_l03f 2012 5' Spike at flowering date 546bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 2.48626e-53
whf_6049_n21f 2012 5' Spike at flowering date 90bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 50 0.000252447
whf_13088_n24f 2012 5' Spike at flowering date 593bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 1.15737e-57
whf_26016_p19f 2012 5' Spike at flowering date 539bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 2.02827e-55
whh_13065_a11f 2012 5' Spike at heading date 504bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 135 2.54067e-50
whh_11025_c02f 2012 5' Spike at heading date 564bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 128 6.31819e-59
whh_13076_h11f 2012 5' Spike at heading date 455bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 297 6.94813e-79
whh_13076_h11r 2012 3' Spike at heading date 554bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 268 5.84516e-70
whh_9085_i18f 2012 5' Spike at heading date 455bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 135 1.08953e-41
whh_22055_m22r 2012 3' Spike at heading date 523bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 252 3.60159e-65
whh_22040_n09f 2012 5' Spike at heading date 537bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 341 5.03884e-92
whh_4056_n10f 2012 5' Spike at heading date 547bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 130 1.13685e-56
whhg_4045_d10f 2012 5' Anther at meiosis of MT4B CS wheat 626bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 1.04076e-49
whhg_18092_f23f 2012 5' Anther at meiosis of MT4B CS wheat 641bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 4.11416e-64
whhg_18092_f23r 2012 3' Anther at meiosis of MT4B CS wheat 608bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 2.28964e-63
whhg_16039_i09f 2012 5' Anther at meiosis of MT4B CS wheat 693bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 424 1.47613e-116
whhg_16039_i09r 2012 3' Anther at meiosis of MT4B CS wheat 774bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 391 1.01785e-106
whhg_8006_k03f 2012 5' Anther at meiosis of MT4B CS wheat 685bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 3.25346e-63
whhg_12001_p01f 2012 5' Anther at meiosis of MT4B CS wheat 567bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 2.38036e-58
whkp_1074_g20f 2012 5' Shoot grown under continuous light 735bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 426 3.36928e-117
whkp_1074_g20r 2012 3' Shoot grown under continuous light 730bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 417 1.53584e-114
whkv_2054_k16f 2012 5' Shoot grown with continuous light after cold treatment 661bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 2.50249e-59
whms_13077_c18f 2012 5' Seed DPA5 of DT3DL CS wheat 566bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 370 2.00627e-100
whms_7026_h08f 2012 5' Seed DPA5 of DT3DL CS wheat 611bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 376 3.41668e-102
whms_7026_h08r 2012 3' Seed DPA5 of DT3DL CS wheat 587bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 351 6.23001e-95
whoh_14049_a16f 2012 5' Pistil at heading date 510bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 303 1.27919e-80
whoh_15049_a16f 2012 5' Pistil at heading date 347bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 228 6.87335e-58
whoh_14049_a16r 2012 3' Pistil at heading date 478bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 226 1.95855e-57
whoh_15049_a16r 2012 3' Pistil at heading date 303bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 168 6.37404e-40
whoh_12074_d05f 2012 5' Pistil at heading date 522bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 307 9.21463e-82
whoh_13074_d05f 2012 5' Pistil at heading date 299bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 194 8.33579e-48
whoh_12074_d05r 2012 3' Pistil at heading date 379bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 156 1.9358e-36
whoh_22016_p01f 2012 5' Pistil at heading date 420bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 131 1.22041e-33
whok_17027_f06r 2012 3' Seed DPA5 602bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 335 4.89491e-90
whpc_17046_d12f 2012 5' Anther at meiosis 712bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 1.81243e-64
whpc_5046_d12f 2012 5' Anther at meiosis 688bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 1.50517e-62
whpc_19059_f14f 2012 5' Anther at meiosis 696bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 423 1.9484e-116
whpc_19059_f14r 2012 3' Anther at meiosis 786bp Contig9320       ChainA,LocalizationOfTheLargeSubunitRibosomalProteinsIntoA5.5ACryo-EmMapOfTriticumAestivumTranslating80sRibosome 424 1.47653e-116
whpc_14026_h08f 2012 5' Anther at meiosis 709bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 5.23425e-64
whpc_17055_i13f 2012 5' Anther at meiosis 729bp Contig9320       Mitochondrialprotein,putative[Medicagotruncatula] 138 3.28089e-66
whpc_17056_i16f 2012 5' Anther at meiosis 149bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 78 7.75165e-14
whpc_17056_i16r 2012 3' Anther at meiosis 126bp Contig9320       hypotheticalproteinNitaMp027[Nicotianatabacum] 51 6.84869e-11
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