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cDNA BLAST Tissue specific clones complex contig list (2012) Query Form  -------------------------- How to use Virtual Display (2012)  -------------------------- Related Sites Download

cDNA

List
*1 Contig derived from a single library   *2 Contig derived from multiple libraries
Hit Count : 35
First Previous 1-35 Next Last All
Accession Clone Registered year Dir. Tissue Sequence Contig*1 Contig*2 Homology (BLAST)
Swiss-Prot nr
Top hit GO ID Term Top hit (Definition) score E-Value
whe_15029_h14f 2012 5' Seed DPA10 568bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 260 1.30632e-67
whe_15029_h14r 2012 3' Seed DPA10 516bp Contig931       hypotheticalproteinSORBIDRAFT_01g005260[Sorghumbicolor] 214 1.3931e-53
whh_7034_b09f 2012 5' Spike at heading date 591bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 300 2.18588e-79
whh_7035_b09r 2012 3' Spike at heading date 494bp Contig931       hypotheticalproteinSORBIDRAFT_01g005260[Sorghumbicolor] 214 1.32398e-53
whh_2074_d05f 2012 5' Spike at heading date 518bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 243 1.64181e-62
whh_2074_d05r 2012 3' Spike at heading date 577bp Contig931       hypotheticalproteinSORBIDRAFT_01g005260[Sorghumbicolor] 248 9.07523e-64
whh_8006_j19r 2012 3' Spike at heading date 283bp Contig931       transmembraneBAXinhibitormotif-containingprotein4[Zeamays] 82 5.91993e-14
whh_6064_p22f 2012 5' Spike at heading date 598bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 292 6.11242e-77
whh_6064_p22r 2012 3' Spike at heading date 488bp Contig931       hypotheticalproteinSORBIDRAFT_01g005260[Sorghumbicolor] 214 1.33614e-53
whkp_1064_b15f 2012 5' Shoot grown under continuous light 762bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 411 1.21596e-112
whkp_1064_b15r 2012 3' Shoot grown under continuous light 659bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 296 3.19165e-78
whkp_13046_c12f 2012 5' Shoot grown under continuous light 321bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 136 2.08278e-30
whkp_13046_c12r 2012 3' Shoot grown under continuous light 661bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 304 2.02292e-80
whpc_9077_d17f 2012 5' Anther at meiosis 747bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 321 2.0682e-85
whpc_9077_d17r 2012 3' Anther at meiosis 706bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 326 3.378e-87
whpc_3039_i09f 2012 5' Anther at meiosis 771bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 423 2.39672e-116
whpc_3039_i09r 2012 3' Anther at meiosis 654bp Contig931       transmembraneBAXinhibitormotif-containingprotein4[Zeamays] 300 2.85236e-79
whr_25007_j13f 2012 5' Root 485bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 232 4.76278e-59
whr_25007_j13r 2012 3' Root 70bp Contig931            
whr_24061_k16r 2012 3' Root 462bp Contig931       hypotheticalproteinSORBIDRAFT_01g005260[Sorghumbicolor] 196 2.21937e-48
whsp_6052_m15f 2012 5' 576bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 306 2.80807e-81
whvd_4092_f23f 2012 5' Shoot grown with dessication 734bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 395 8.3181e-108
whxa_20061_d13f 2012 5' Root 656bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 348 9.13327e-94
whxb_33067_m18f 2012 5' Root 611bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 342 5.46748e-92
whxd_26027_e05f 2012 5' Root, treated at 50 microM Al for 6h 519bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 318 4.01588e-85
whxd_26027_e05r 2012 3' Root, treated at 50 microM Al for 6h 595bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 318 1.02911e-84
whxe_16080_b20f 2012 5' Seedling, infected with leaf rust 396bp Contig931       transmembraneBAXinhibitormotif-containingprotein4[Zeamays] 96 4.09155e-18
whxe_19005_l01f 2012 5' Seedling, infected with leaf rust 661bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 340 2.54716e-91
whxh_40020_n07f 2012 5' Seedling, infected with powdery mildew (AvrPm3b) 467bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 258 4.73473e-67
HX001015 whxi_5064_b16r 2012 3' Two-week old seedlingsi22Ž 16L-8Dj 295bp Contig931       transmembraneBAXinhibitormotif-containingprotein4[Zeamays] 78 6.69066e-13
HX025319 whxk_14039_i09f 2012 5' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 406bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 197 1.28292e-48
HX025336 whxk_14039_i09r 2012 3' Shoots, two-week old seedlings treated with 150-mM NaCl for 6h (22Ž 16L-8D) 590bp Contig931       hypotheticalproteinSORBIDRAFT_01g005260[Sorghumbicolor] 256 3.61977e-66
HX072347 whxo_13063_a14r 2012 3' Leaves, seedling were infercted with blast strain Pr48 for 4 days (23Ž ) 357bp Contig931       transmembraneBAXinhibitormotif-containingprotein4[Zeamays] 113 2.43904e-23
HX182865 whxu_21015_a02f 2012 5' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 784bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 409 6.36784e-112
HX182887 whxu_21015_a02r 2012 3' Roots, 18 day old plants were grown hydroponically (supplemented with 10 mM Boric Acid for 24 h) 678bp Contig931       PREDICTED:BI1-likeprotein-like[Brachypodiumdistachyon] 313 2.69025e-83
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